search for: holtmans

Hello, As recommended by N. Gunther, I'm writing you because I have some difficulties to create a script to track computer performance, as done in Holtman, 2005 (Visualization techniques for analysing patterns in system performance). I would like to do a leveplot, with the kind of file here enclosed. I assume I should create a matrix in R, then use the function 'image'. As I am not

'grepl' returns a logical vector; you have to use this to get your subset. You can use: df_tq <- subset(df, grepl("t1", Command)) df_t2 <- subset(df, grepl("t2", Command)) # if you want to also get a subset that has both, use df_both <- subset(df, grepl("t1", Command) & grepl("t2", Command)) Jim Holtman Data Munger Guru What is

Hi, I have a dataframe SDF1 that looks like this: Char1 Char2 Char 3 W.2007.02 W.2007.09 W.2007.16 W.2008.13 A C1 F1 F2 F3 A C2 F4 B C3 F5 F6 I have another dataframe SDF2 with 163 cols that has the following column names Char1 Char2 Char 3 W.2007.02 W.2007.03 W.2007.04

now after this: df_both <- subset(df, grepl("t1", Command) & grepl("t2", Command)) I use factor to apply the subset to df but then the Command level becomes 0 df_both$Command=factor(df_both$Command) str(df_both) $ Protocol : Factor w/ 0 levels: Do you know what is the reason? Thanks for replying On Sunday, April 24, 2016 12:18 PM, jim

---------- Forwarded message ---------- From: jim holtman <jholtman at gmail.com> Date: Sun, Sep 7, 2008 at 11:42 AM Subject: Re: [R] request: most repeated sequnce To: Muhammad Azam <mazam72 at yahoo.com> This should do it for you: > x=c(1,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,1,2,2,2,3,3,0,0,0,0,0,0,0,0,0,0,1,1,1,2,2,3,3,3,4,4,4,0,0,0,0,0,0,0,1,1,1,2,2,2,3,3,3,4,4,4, +

Hi all, here is my situation In my experiment, I expose 10 subjects to 24 different conditions of stimuli. Each condition is exposed to the same subject 3x. This would make each subject have 24x3=72 data points. All the subjects combined would have 72x10=720 data points with each condition having 30 datapoints. To find the grand average of each condition, I find the average of all the

Hey, Can anyone answer this question. I am working with really large datasets and most of the programs I have been running take quite some time. I heard that R may be faster in Unix. I sthis true and if so can anyone reccomend which system and requirements may allow things to go faster for? Thanks!! Elizabeth Lawson --------------------------------- [[alternative

Hi All, I am interested in aggregating a data frame based on 2 categories--mean effect size (r) for each 'id's' 'mod1'. The 'with' function works well when aggregating on one category (e.g., based on 'id' below) but doesnt work if I try 2 categories. How can this be accomplished? # sample data id<-c(1,1,1,rep(4:12)) n<-c(10,20,13,22,28,12,12,36,19,12,

I need to put labels in plot in R. Can someone please help? The labels are in the excel file and loaded into "lables" library(xlsx) library(zoo) fPTAnalysis<-"Input.xls" data<-read.xlsx(fPTAnalysis,9) lables<-subset(data, select=c(Labels)) data<-subset(data, select=c(Date,col1, col2 )) data<-read.zoo(data) plot(data) -- Regards, Ankur Seth [[alternative

Dear sir/madam, I have been using R for a while now for microarray analysis, and I would like to make a "master" data frame in which I can combine information from many different sources. The basic list a genelist with 25.000 probes, then I would like to have a subcompartment with the statistical information, a subcompartment with more extensive information regarding each gene, and then

Hi All, What is the R function for computing multinomial distribution, e.g. f(2,1,3; 2/9, 1/6, 11/18, 6)? That is, a total of 6 trials, event 1's p1=2/9, x1=2, event 2's p2=1/6, x2=1, and event 3's p3=11/18, x3=3. thanks, Johnny [[alternative HTML version deleted]]

Hi all, I wonder if there is a way to create a matrix with two (or even more) column/row names? Thank you very much. Have a nice day. -- ??? Hesen Peng http://hesen.peng.googlepages.com/

I have a function that does some plotting. I then add lines to the plot. If executed one line at a time, there is not a problem. If I execute the function, though, I get: Error in ans[[1]] : subscript out of bounds This always occurs after the second lines command, and doesn't happen with all of my data points (some do not have errors). Any ideas? Thanks, Sean

Hi, I'm fairly new to R but I have a large dataset (300000 obs) containing patient material. Some patients came 2-9 times during the three year observation period. The patients are identified by a unique idnr, the sessions can be distinguished using the session date. How can I recode the date of the session to a session id (1-9). This would be necessary to obtain information and do some

I generated a PDF output file of 10 plots. When I try to view it with Adobe reader (R4 & R5), it will lockup the reader (it is consuming 100% of the CPU) after presenting the 4th plot. I can generate the plots just fine in Windows and as a postscript file reading it with GSview. Is there anyway to tell what might be wrong with the PDF output? The file is 890KB in size if anyone would like

Dear all, does anybody ever encountered the problem with diagnostic plots? x<-rnorm(100) y<-rnorm(100) plot(lm(x~y)) It gives the following message "Waiting to confirm page change..." and nothing happens. Thanks a lot! [[alternative HTML version deleted]]

Why does the expression "(-8)^(1/3)" return NaN, instead of -2? This is not answered by http://cran.r-project.org/doc/FAQ/R-FAQ.html#Why-are-powers-of-negative-numbers-wrong_003f Thanks, Dave [[alternative HTML version deleted]]

Hi all, I've got a matrix of fractional data that is all positive and greater than zero that I would like to "loosely" classify, for lack of a better word. It looks something like this : 1.07 1.11 1.27 1.59 0.97 0.76 2.23 0.98 0.71 0.88 1.19 1.02 What I'm looking for is a way to round these numbers to the nearest 0.25, i.e. the above matrix would be

Hello R users, Good day!! I was wondering if there is a way in R to read in a particular column from a tab-delimited file, edit it and write it back into the file with all other columns intact. When I say edit I mean just replacing all the values in that column. I know to read a particular column from a file using colClasses option in read.delim() function. Is there any such option to write out

I asked the maintainer and he indicated that it might be a dll problem. Has anyone see this problem? I had installed the latest copy of tkrplot. I was trying to use teachingDemos when I first got the error. On 1/18/07, Luke Tierney <luke@stat.uiowa.edu> wrote: > Looks like tcl can't find the dll or something along those lines. As > this is windows you'll have to ask