Displaying 2 results from an estimated 2 matches for "hmcol".
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mcol
2016 Apr 18
2
heatmap2 error key
...wn-v4.csv", sep=",", header=T)
data =data.matrix (GO_Fil[,3:4]) # define which columns to use for the
heatmap
rownames(data) <- GO_Fil$Description
summary (data)
pairs.breaks <- c(seq(-6, -0.01, length.out=50), seq(-0.02,
0.01,length.out=150), seq(0.02, 3.9,length.out=80))
hmcols<- colorRampPalette(c("blue","white", "red"))(length(pairs.breaks)-1)
pdf("Heat_1hv6h-updown-key.pdf",
width = 15,
height = 20,
pointsize = 5)
hm<- heatmap.2(data, breaks=pairs.breaks, col=hmcols, na.color="white",...
2007 Sep 05
1
problem formatting and positioning title in heatmap
...title the upper line is out of
bounds and doesn't show up.
I am outputting to pdf.
Any help? Thanks, Mark
heatmap(x = dataM, RowSideColors = RowSideColors,
ColSideColors=ColSideColors, main = title,
margins = c(50,50), scale= do.scale ,labRow=geneNames,
labCol=colLabels, col = hmcol, cex.main = 1,
cexRow = row.lab.mag, cexCol = col.lab.mag)
> sessionInfo()
R version 2.6.0 Under development (unstable) (2007-08-29 r42686)
i686-pc-linux-gnu
locale:
LC_CTYPE=en_US.UTF-8;LC_NUMERIC=C;LC_TIME=en_US.UTF-8;LC_COLLATE=en_US.UTF-8;LC_MONETARY=en_US.UTF-8;LC_MESSAGES=en_...