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elf
2009 Jun 20
1
string splitting and testing for enrichment
Hi List
I have data in the following form:
Gene TFBS
NUDC PPARA(1) HNF4(20) HNF4(96) AHRARNT(104) CACBINDINGPROTEIN(149) T3R(167) HLF(191)
RPA2 STAT4(57) HEB(251)
TAF12 PAX3(53) YY1(92) BRCA(99) GLI(101)
EIF3I NERF(10) P300(10)
TRAPPC3 HIC1(3) PAX5(17) PAX5(110) NRF1(119) HIC1(122)
TRAPPC3 EGR(26) ZNF219(27) SP3(32) EGR(32) NFKAPPAB65(89) NFKAPPAB(89) RFX(121) ZTA(168)
NDUFS5 WHN(14) ATF(57) EGR3(59)...