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...a 1 > noerror() -a 1 -a 1 -a 1 -a 1 -a 1 -a 1 -a 1 -a 1 -a 1 -a 1 -a 1 -a 1 > Now why does that "<e2><80><93>" replace one of the "-" in the first command? Any ideas? Cheers Tom -- Thomas Allen Department of Biochemistry University of Otago email1: hedbag at gmail.com email2: allth025 at student.otago.ac.nz Work: (+64)3 479 5123 Mobile: 027 321 4269

..."kludges" like: > options(error=function(x=geterrmessage()){cat(x)}) Thank you for any help and please ask me to explain my situation in more detail if necessary -- Thomas Allen Department of Biochemistry University of Otago 710 Cumberland street Box 56 Dunedin New Zealand email1: hedbag at gmail.com email2: allth025 at student.otago.ac.nz Only the insane have strength enough to prosper and only those who prosper can truly judge what is sane

I'm wanting to run R scripts non-interactively as part of a "technology independent" framework. I want control over the behaviour of these processes by specifying various global variables in a "configuration file" that would be passed as a command line argument. I'm wondering if you know of any R support for configuration file formats. (i.e. any functions that would

...ations and not memory release (or am I blind?) What I'm really asking is what are some really informative memory management tools for observing and controlling memory usage in R on a unix based system? Kind regards Tom -- Thomas Allen Department of Biochemistry University of Otago email1: hedbag at gmail.com email2: allth025 at student.otago.ac.nz Work: (+64)3 479 5123 Mobile: 027 321 4269

...attain the deviance of the model fitted to the training set. But is there a way to get the deviance within the test set? Cheers Tom -- Thomas Allen Department of Biochemistry University of Otago 710 Cumberland street Box 56 Dunedin New Zealand Work: (+64)3 479 5123 Mobile: 027 321 4269 email1: hedbag at gmail.com email2: allth025 at student.otago.ac.nz Only the insane have strength enough to prosper and only those who prosper can truly judge what is sane

hi are you using a 64bit system? 32 bit systems can only allocate about 3GB to a single process. http://msdn.microsoft.com/en-gb/library/aa366778.aspx I used to use 32bit winXP, then moved to 64bit Ubuntu8.04 to solve my memory problems. if you are 64bit, you should try playing around with the command line arguments for executing R and also look at the functions ?memory.limit and ?memory.size

Dear R Users I'm trying to acquire a metric for how similar two graphs are by doing inexact graph matching. I heard that the "Graph Edit Distance" is one such metric. Do you know of any R packages (off the top of your head) that implement an algorithm for calculating this from a pair of adjacency matrices? I had a quick skim-look on Cran but couldn't find anything. Cheers Tom