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hdf5_install
2010 Mar 03
1
linking hdf5, requires setting LD_LIBRARY_PATH
...o build/install things locally so that aspects of the system I am working
on don't cause problems later when attempting to install elsewhere. To
this end, I build and install the hdf5 libraries w/out incident:
tar xzf hdf5-1.8.4.tar.bz2
cd hdf5-1.8.4
./configure --prefix=/home/jbullard/scratch/hdf5_install
make && make install
Now, I make a shared object using the following (I am compiling hdf5.c
directly in src of the hdf5 package):
gcc -I/home/jbullard/projects/me/R-builder/lib64/R/include
-I/home/jbullard/scratch/hdf5_install/include -I/usr/local/include -fpic
-g -O2 -std=gnu99 -c hdf5....