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I'm testing some different formulations of pairwise interaction point processes in Spatstat (version 1.11-6) using R 2.5.0 on a Windows platform and I wish to simulate them using the Metropolis-Hastings algorithm implemented with Spatstat. Spatstat utilizes Fortran77 code with the preprocessor RatFor to do the Metropolis-Hastings MCMC, but the Makefile is more complicated than any I have worked with. Any suggestions on how I could get started working with the Fortran code in conjunction with R...

Hello all, could you tell where is an example of metropolis hasting? Thank you! Tania Sent from my iPod

For those who may be interested, the Highly Available Storage (HAST) project has recently been committed to HEAD in FreeBSD. Obviously, it is still early release and potentially not suitable for a production environment, but may be of interest to those like myself who are on the lookout for a flexible and available network storage option for Xen. More info here:...

Hello, I'm trying to integrate HAST to NAS4Free (FreeBSD 9.1-RC3). Now I have created version 9.1.0.1.531. http://sourceforge.net/projects/nas4free/files/NAS4Free-9.1.0.1/9.1.0.1.531/ Basic CARP + HAST + iSCSI target setup can be done, but very frequently I get hastctl hang when called: /sbin/hastctl status /sbin/hastctl dump Is...

...<-matrix(0,n,2) theta1[1,]<-mu for(i in 2:n){ theta<-theta1[i-1,] phi<-theta+runif(-0.5,0.5) k<-rbinom(1,1,alpha(theta,phi)) k1<-k1+k theta1[i,]<-theta+k*(phi-theta) } plot(theta1) Thanks alot :) -Mike -- View this message in context: http://r.789695.n4.nabble.com/Metropolis-Hastings-in-R-tp4472547p4472547.html Sent from the R help mailing list archive at Nabble.com.

Following is my code, can some one help on the error at the bottom? > mh<-function(iterations,alpha,beta){ + data<-read.table("epidemic.txt",header = TRUE) + attach(data, warn.conflicts = F) + k<-97 + d <- (sqrt((x-x[k])^2 + (y-y[k])^2)) + p <- 1-exp(-alpha*d^(-beta)) + p.alpha<-1 - exp(-3*d^(-beta)) + p.beta <- 1 - exp(alpha*d^(-2)) +

Hi, Do any body know which packages of R I need to go for the below topics? 1. Monte Carlo Markov chain (MCMC) 2. Gibbs Sampling 3. Metropolis Hastings Thanks in advance... Shubha [[alternative HTML version deleted]]

On Oct 8, 2009, at 5:18 PM, Mike Stump wrote: > On Oct 8, 2009, at 4:52 PM, Stuart Hastings wrote: >> Currently, to get LLVM to build "Apple-style," it's necessary to >> copy two files (utils/buildit/GNUmakefile and utils/buildit/ >> build_llvm) into the top-level directory. > > Why not: > > $ RC_ARCHS="x86" make > echo Apple...

...,]<- c(rnorm(1, 0, (1/parameter.matrix[i-1,3])), rnorm(1, 0, (1/parameter.matrix[i-1,3])), rgamma(1, shape=(a0+1), rate=(1/b0+(parameter.matrix[i-1,1]^2+parameter.matrix[i-1,2]^2)/2))) # as the Gamma with specified parameters is the conditional for tau given beta, data # implementing Metropolis-Hastings within Gibbs to get estimates of beta0 and beta1 proposal.b0[i]<-sum(log( ((exp(parameter.matrix[i,1])^y)/((1+exp(parameter.matrix[i,1])^n))*exp(-parameter.matrix[i-1,3]*(parameter.matrix[i,1]^2)/2)))) proposal.b1[i]<-sum(log( ((exp(parameter.matrix[i,2]*x)^y) / ((1+exp(parameter.m...

Taking a survey. 1. How many of you have a remote site hot backup Dovecot IMAP server? 2. How are you replicating mailbox data to the hot backup system? A. rsync B. DRBD+GFS2 C. Other Thanks. -- Stan

Hallo, Ich habe ebendfalls das Problem, dass ich mich extra anmelden muss bei meinem Linux-Server. Hast Du da eine L?sung gefunden. From: "Marcel Stein" <marcel-stein@arcor.de> Subject: samba und netzlaufwerke unter winxp Date: Thu, 26 Jun 2003 20:04:56 +0200 Message-ID: <000001c33c0d$76d703f0$0201a8c0@winxp> Ich habe einen samba zu laufen und greife vom client winxp darauf...

On Oct 9, 2009, at 8:40 AM, Stuart Hastings wrote: > > On Oct 8, 2009, at 5:18 PM, Mike Stump wrote: > >> On Oct 8, 2009, at 4:52 PM, Stuart Hastings wrote: >>> Currently, to get LLVM to build "Apple-style," it's necessary to >>> copy two files (utils/buildit/GNUmakefile and utils/buildit...

...lpha*d) for(i in 1:100){ if(i!=k){ if(inftime[i]==0){ lh<-lh*(1-p[i]) } if(inftime[i]==2){ lh<-lh*p[i] } } } return(lh) } Then, I want to simulate this by using random walk Metropolis- Hasting algorithm with the single parameter update. i have the following R function mh.epidemic <-function(m,alpha, beta){ z<- array(0,c(m+1, 2)) z[1,1] <- alpha z[1,2] <- beta for(t in 2:m){ u <- runif(1) y1 <- rexp(1,z[t-1,1]) y2 <-rexp(1,...

IANACE (I Am Not A Configury Expert :-), but I've been asked to reconfigure LLVM and LLVM-GCC to build with LLVM-GCC (perhaps more accurately, LLVM-G++). The patches to do this are short. In the LLVM tree, this suffices; it looks for LLVM-GCC first, and if that fails, falls back to GCC: Index: llvm.test/autoconf/configure.ac

...he pid change - I''m hoping someone in the community will have some understanding of this issue I documented my experience and eventual defeat here : http://log.robotarmyma.de/post/2053448029/daemontools-ubuntu-rvm-bundler-unicorn-install Any help would be received graciously. -- make haste slowly \ festina lente ?\ - mobile ?+1_415_632_6001 curtis.schofield at gmail.com http://robotarmyma.de

Currently, to get LLVM to build "Apple-style," it's necessary to copy two files (utils/buildit/GNUmakefile and utils/buildit/build_llvm) into the top-level directory. This is generally a PITA inside of Apple. (I'll spare you the gory details. :-) I'd like to fix this for Apple, and I want to avoid compromising anybody else's build system. I've never used

On Jul 6, 2009, at 5:24 PM, Eli Friedman wrote: > On Mon, Jul 6, 2009 at 3:47 PM, Stuart Hastings<stuart at apple.com> > wrote: >> IANACE (I Am Not A Configury Expert :-), but I've been asked to >> reconfigure LLVM and LLVM-GCC to build with LLVM-GCC (perhaps more >> accurately, LLVM-G++). > > The attached patches affect the *tests*, not the actual bui...

On Oct 8, 2009, at 4:52 PM, Stuart Hastings wrote: > Currently, to get LLVM to build "Apple-style," it's necessary to > copy two files (utils/buildit/GNUmakefile and utils/buildit/ > build_llvm) into the top-level directory. Why not: $ RC_ARCHS="x86" make echo Apple Build. Apple Build. $ make echo St...

On Oct 9, 2009, at 12:34 PM, Mike Stump wrote: > > On Oct 9, 2009, at 8:40 AM, Stuart Hastings wrote: > >> >> On Oct 8, 2009, at 5:18 PM, Mike Stump wrote: >> >>> On Oct 8, 2009, at 4:52 PM, Stuart Hastings wrote: >>>> Currently, to get LLVM to build "Apple-style," it's necessary to >>>> copy two files (utils/buildit/G...

On May 12, 2011, at 12:30 AM, Sandeep Patel wrote: > On Wed, May 11, 2011 at 11:42 PM, Stuart Hastings <stuart at apple.com> wrote: >> >> On May 9, 2011, at 1:41 PM, Renato Golin wrote: >> >> [snip] >> >>> One example is the struct byval. The ARM back-end still doesn't >>> support struct byval (maybe now it does, I was away for a while...