search for: hankin

Hi I have a package that I'm testing. It seems to install fine and it works, as far as I can tell. For example, I can install the package, and use it, and source the test suite with no errors. My problem is with R CMD check. It passes on R-2.2-0: Robin-Hankins-Computer:~/scratch% R CMD check ./partitions_1.1-0.tar.gz * checking for working latex ... OK [snip] make[1]: Leaving directory `/users/sat/rksh/partitions.Rcheck/tests' OK * creating partitions-manual.tex ... OK * checking partitions-manual.tex ... OK But it doesn't pass on R-2.3.0,...

...o. I wasn't able to configure R to use OpenBLAS using the configure script and options on my Linux Fedora system. I configure it without external BLAS, then replace the libRblas.dylib (.so in my case) with a link to the OpenBLAS dynamic link library. Peter On Tue, May 7, 2019 at 7:39 PM robin hankin <hankin.robin at gmail.com> wrote: > thanks Peter, I appreciate your advice here. > > ./configure --with-blas="-lopenblas" --without-recommended-packages > > > gives me > > > > > Interfaces supported: X11, aqua, tcltk > > External...

...t;)} falls over. help.search("trap") was not very helpful. try() doesn't help either: R> try(if(1==NA){print("asdf")}) Error in if (1 == NA) { : missing value where logical needed QUESTION: how to make f() not give an error under any circumstances? -- Robin Hankin, Lecturer, School of Geography and Environmental Science Tamaki Campus Private Bag 92019 Auckland New Zealand r.hankin at auckland.ac.nz tel 0064-9-373-7599 x6820; FAX 0064-9-373-7042

Hi has anyone coded up domain colouring for visualizing complex analytic functions (such as elliptic functions)? [ the idea is to depict a complex function f(z) using a filled.contour() variant in which the hue is given by Arg(f(z)), and the saturation by Mod(f(z)). ] -- Robin Hankin Uncertainty Analyst Southampton Oceanography Centre European Way, Southampton SO14 3ZH, UK tel 023-8059-7743

...under winbuilder and all but one of the checks). I've downloaded and installed openblas 0.3.7 but I am not 100% sure that it is being used by R. Using ./configure --with-blas="-lopenblas" Then running R to discover the PID I get: Rd % lsof -p 17960|egrep -i blas R 17960 rhankin txt REG 1,8 189224 33471762 /Users/rhankin/Rd/lib/R/lib/libRblas.dylib But it is not clear to me how to interpret this. Am I using openblas as intended? I suspect not, for I cannot reproduce the error. Can anyone advise? hankin.robin at gmail.com

...t; [2,] "d" "e" "f" [3,] "g" "h" "i" into R> simple.example.numeric [,1] [,2] [,3] [1,] 1 2 3 [2,] 4 5 6 [3,] 7 8 9 [ie "a" becomes 1, ..., "z" becomes 26] ? -- Robin Hankin, Lecturer, School of Geography and Environmental Science Tamaki Campus Private Bag 92019 Auckland New Zealand r.hankin at auckland.ac.nz tel 0064-9-373-7599 x6820; FAX 0064-9-373-7042

...essors. Is there a neat vectorized method I could use? The best I can come up with is "tapply(x$Q1A,x$name,mean,na.rm=T)" but this works question-by-question and I would like a reduced data frame with the same column headings. this is driving me crazy; thanks in advance! -- Robin Hankin, Lecturer, School of Environmental and Marine Science Private Bag 92019 Auckland New Zealand r.hankin at auckland.ac.nz tel 0064-9-373-7599 x6820; FAX 0064-9-373-7042 --f9295XO03655.1002013533/r.hankin.sems.auckland.ac.nz-- -- Robin Hankin, Lecturer, School of Environmental and Marine Scie...

...re elements supplied than there are to replace > The error is given because after B[[1]] <- a, the variable B is just a scalar and not a matrix (why is this?) What's the bulletproof method for assigning matrices to a list (whose length is not known at runtime)? -- Robin Hankin Uncertainty Analyst National Oceanography Centre, Southampton European Way, Southampton SO14 3ZH, UK tel 023-8059-7743

OK thanks Tomas, but I get OK~ sudo apt-get build-dep r-base Reading package lists... Done E: Unable to find a source package for r-base OK~ hankin.robin at gmail.com On Fri, Mar 1, 2019 at 8:47 PM Tomas Kalibera <tomas.kalibera at gmail.com> wrote: > > On 3/1/19 7:10 AM, robin hankin wrote: > > thanks for this guys. > > > > I only compiled pcre myself as a last resort, because of the > > ./configure fail...

OK thanks Tomas, but I get OK~ sudo apt-get build-dep r-base Reading package lists... Done E: Unable to find a source package for r-base OK~ hankin.robin at gmail.com On Fri, Mar 1, 2019 at 8:47 PM Tomas Kalibera <tomas.kalibera at gmail.com> wrote: > > On 3/1/19 7:10 AM, robin hankin wrote: > > thanks for this guys. > > > > I only compiled pcre myself as a last resort, because of the > > ./configure fail...

(this after asking the package author) Hi I cannot install the rmvnorm package under R-2.3.0, or R-2.3.1 beta. It installs fine under R-2.2.1. transcript for installation under R-2.3.0 follows. Robin-Hankins-Computer:~/scratch% R --version R version 2.3.0 (2006-04-24) Copyright (C) 2006 R Development Core Team R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under the terms of the GNU General Public License. For more information about these matters, see ht...

...orm, adapt Contains: emulator calibrator approximator Title: Bayesian Analysis of Computer Code Output BundleDescription: Bayesian analysis of computer code software. The bundle contains routines that evaluate the formulae of Kennedy, O'Hagan, and Oakley. License: GPL Author: Robin K. S. Hankin <r.hankin at noc.soton.ac.uk> Maintainer: Robin K. S. Hankin <r.hankin at noc.soton.ac.uk> URL: http://www.noc.soton.ac.uk/JRD/SAT/pers/rksh.html octopus:~/scratch/BACCO/calibrator% cat DESCRIPTION.in Package: calibrator Description: Performs Bayesian calibration of computer models a...

On 3/1/19 9:03 AM, robin hankin wrote: > OK thanks Tomas, but I get > > > OK~ sudo apt-get build-dep r-base > Reading package lists... Done > E: Unable to find a source package for r-base > OK~ It seems you need to enable source code? repositories on your system (and then run apt-get update). You can enable...

On 3/1/19 9:03 AM, robin hankin wrote: > OK thanks Tomas, but I get > > > OK~ sudo apt-get build-dep r-base > Reading package lists... Done > E: Unable to find a source package for r-base > OK~ It seems you need to enable source code? repositories on your system (and then run apt-get update). You can enable...

...2} R> f1 -> f2 R> f2(4) [1] 16 R> R> function(x){x^2} -> f3 function(x){x^2} -> f3 R> f3(4) Error: couldn't find function "f3" Why does right assignment "->" work in the first but not the second case? Can anyone else reproduce this? -- Robin Hankin, Lecturer, School of Geography and Environmental Science Tamaki Campus Private Bag 92019 Auckland New Zealand r.hankin at auckland.ac.nz(nospam) tel 0064-9-373-7599 x6820; FAX 0064-9-373-7042

....launchpad.net/marutter/rdev/ubuntu bionic Release' does not have a Release file. N: Updating from such a repository can't be done securely, and is therefore disabled by default. N: See apt-secure(8) manpage for repository creation and user configuration details. root at limpet:/etc/apt# hankin.robin at gmail.com hankin.robin at gmail.com On Fri, Mar 1, 2019 at 9:19 PM Tomas Kalibera <tomas.kalibera at gmail.com> wrote: > > On 3/1/19 9:03 AM, robin hankin wrote: > > OK thanks Tomas, but I get > > > > > > OK~ sudo apt-get build-dep r-base > &gt...

Hi How do I generate all ways of ordering sets of indistinguishable items? suppose I have two A's, two B's and a C. Then I want AABBC AABCB AACBC ABABC . . .snip... BBAAC . . .snip... CBBAA [there are 5!/(2!*2!) = 30 arrangements. Note AABBC != BBAAC] How do I do this? -- Robin Hankin Uncertainty Analyst National Oceanography Centre, Southampton European Way, Southampton SO14 3ZH, UK tel 023-8059-7743

...want "ash" and "elm", because there is only one ash and only one elm in my wood. My Best Effort: > names(table(a)[table(a)==1]) [1] "ash" "elm" > This doesn't seem particularly elegant to me; there must be a better way! anyone? -- Robin Hankin Uncertainty Analyst National Oceanography Centre, Southampton European Way, Southampton SO14 3ZH, UK tel 023-8059-7743

This is a bad bug as reported by Robin Hankin, it is still in "R-patched" ... ##- From: Robin Hankin <r.hankin@auckland.ac.nz> ##- To: r-help@stat.math.ethz.ch ##- Subject: [R] possum sleeping: thanks and fisher.test() FEXACT error ##- Date: Thu, 13 Jun 2002 16:46:26 +1200 ## ..... ## Example slighlty modified (MM) d4 <-...

...in the distribution. For me, the most noticable one is at about 3.6. Do others get this? Is it an optical illusion? It can't be right, can it? Or maybe I just don't understand the good ol' Gaussian very well. anyone got an explanation? [linux redhat 7.1; R-1.6.1] -- Robin Hankin, Lecturer, School of Geography and Environmental Science Tamaki Campus Private Bag 92019 Auckland New Zealand r.hankin at auckland.ac.nz tel 0064-9-373-7599 x6820; FAX 0064-9-373-7042 as of: Wed Nov 27 09:15:00 NZDT 2002 This (linux) system up continuously for: 454 days, 14 hours, 57 minutes -.-...