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gsm95617
2011 Feb 25
1
limma function problem
...cdf=Zebrafish (15617 affyids)
number of samples=6
number of genes=15617
annotation=zebrafish
notes=Merge from two AffyBatches with notes: 1) , and 2)
> design
Wild Mz_Dicer
GSM95623.CEL 1 0
GSM95624.CEL 1 0
GSM95625.CEL 1 0
GSM95617.CEL 0 1
GSM95618.CEL 0 1
GSM95619.CEL 0 1
> fit <-lmFit(merge.fish, design)
Error in as.vector(data) :
no method for coercing this S4 class to a vector
> mode(merge.fish)
[1] "S4"
So, how to troubleshoot this problem?
Regards,
Sukhbir Singh Rattan.....
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