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gsm36777
2008 May 06
1
Significance analysis of Microarrays (SAM)
...xperiment
with survival data using the {samr} package. I have a matrix containing my
data which has 17816 rows corresponding to genes, and 286 columns
corresponding to samples. The name of this matrix is data.matrix2. Some of
the first values of this matrix are:
data.matrix2[1:3,1:5]
GSM36777 GSM36778 GSM36779 GSM36780 GSM36781
[1,] 1.009274 1.0740659 1.048540 1.015946 1.022650
[2,] 1.007992 0.8768410 0.962442 1.111742 1.121150
[3,] 0.981853 0.9606492 1.024987 1.053302 1.063408
I also have the time in which each patient-sample is examined for relapse.
This information is in vector y, which has...