search for: gsl

On 13/09/2017 5:23 AM, Brayford, David wrote: > When I try to install gsl in R I get the error Need GSL version >= 1.12 . However, I have version 2.3 of gsl installed on the system, which is picked up earlier in the configure process (see below). Is it possible for someone to fix this error in the configure script? > > checking for gsl-config... /lrz/sys/librar...

When I try to install gsl in R I get the error Need GSL version >= 1.12 . However, I have version 2.3 of gsl installed on the system, which is picked up earlier in the configure process (see below). Is it possible for someone to fix this error in the configure script? checking for gsl-config... /lrz/sys/libraries/gsl/2....

Dear R users: I have a problem when installing the R package *gsl*. The procedure is as follows: (1) Since it needs a GSL vesion >=1.12, and the GSL library on the serve I use is too old, I download GSL 1.15 and install it in my own account, such as $HOME/local/gsl. Because I do not have root access, so it cannot be installed in standard folder. (2) Then I...

On 13/09/2017 9:10 AM, David Brayford wrote: > Hi Duncan, > > The output of gsl-config --version > 2.3 > > The output of gsl-config --cflags > -I/lrz/sys/libraries/gsl/2.3/include > > The output of gsl-config --libs > -L/lrz/sys/libraries/gsl/2.3/lib -lgsl -lgslcblas -lm > > gsl_version.h cat output > #define GSL_VERSION "2.3" > #d...

Hi, I'm trying to install the gsl wrapper source code (http://cran.r-project.org/src/contrib/gsl_1.9-8.tar.gz) on a Linux system (OpenSuse 11.1), but encountering the following problem. I've already installed 'gsl' version 1.14 (ftp://ftp.gnu.org/gnu/gsl/gsl-1.14.tar.gz) on the system. What's missing? Thanks a lot.....

Hi all, I am new to R and am writing after having contacted Robin Hankin, who maintains the R gsl wrapper. I am trying to use an AFNI (neuroimaging analysis) program that depends on the R gsl package. When I try to use the script I wrote, I get an error that led me to suspect the gsl package was a culprit. When I do library("gsl") within R, I get: Error in dyn.load(file, DLLpa...

...make the functions and corresponding source code available through an R package. I have successfully created the code necessary to create and install a package with most of the functions on my local machine (using R CMD check,R CMD build, and R CMD INSTALL). As my code makes extensive use of the GSL matrix library, however, I have some questions regarding portability of my package. I am also running into some memory issues when making repeated calls to my functions which I would hope to be able to fix before making a formal distribution of the package. More specifically, the issues are the fol...

hello I maintain the gsl R package, and many users have recently reported that the package does not install from source under macosx 10.9 ("mavericks"). Users typically install the gnu GSL library and are able to compile and run a small "hello world" program which executes some of the Bessel functional...

Hi I want to install the R package gsl, which is a wrapper to the library GSL. Installation fails as it seems that I did not install the right GSL library: * Installing *source* package 'gsl' ... checking for gcc... gcc checking for C compiler default output... a.out checking whether the C compiler works... yes checking whethe...

Hello everyone, I've tried to install the R gsl package but without success because R claims there needs to be a gsl library version >= 1.12 installed on the system. Actually gsl library version 1.12 is installed locally in my home directory and I set PATH and LD_LIBRARY_PATH in .bash_profile to point to corresponding bin and lib directory. g...

Full_Name: Levi Waldron Version: 2.5.1 OS: Ubuntu Gutsy Submission from: (NULL) (206.248.157.88) I installed libgsl0-dev then tried to install the gsl cran package, unsuccessfully (see output below). As a workaround I created a symbolic link to /usr/bin/gcc-4.2, ie: sudo ln -s /usr/bin/gcc-4.1 /usr/bin/gcc-4.2 The correct behavior of the gsl package should be to use the executable '/usr/bin/gcc' which...

On 01/11/16 21:08, Kirill M?ller wrote: > Did you reinstall the gsl package [1]? Apparently not. I did a complete update.packages() which reinstalled a great number of packages (I have a great number in my personal library). There were complaints about 4 packages, one of which was "copula", but "gsl" was not one of them. I would have *thought...

Dear fellow R users, I am now investing time in learning how to use compiled C code to produces functions that can be used in R. I am just starting, and there is much that I need to learn, so I have a question that might be straight forward. I am learning how to use function in the C library GSL (gnu scientific library), to write C code, that I then plant to use in R. Is there any problem in doing this? I mean, using functions of GSL to write C funtions to then use them in R? I just want to make sure that this approach is correct, before I invest more time trying to figure out how to inclu...

...ce code (in the directory pkg/src). Only a subset of the functions in the pkg/R directory contain a .C() call to the functions in the pkg/src directory. The rest of the package will still work and be useful without the functions containing a .C() call. To compile the code in pkg/src requires the GSL library. This is detailed in the SystemRequirements line of the DESCRIPTION file and the Makevars file directs the compiler to LIB_GSL. At what stage will installation fail for the end user if they don't have GSL installed? I have used Autoconf and configure, following the example in 1.2 of...

I am trying to install the gls package (a wrapper for GNU scientific library special functions) package under Ubuntu 5.10. I have gls-bin (the debian GNU Scientific Library binary package). When I try to install the R package, I receive the following. > install.packages("gsl",dependencies=T) Warning in install.packages("gsl", dependencies = T) : argument 'lib' is missing: using /usr/local/lib/R/site-library trying URL 'http://lib.stat.cmu.edu/R/CRAN/src/contrib/gsl_1.6-6.tar.gz' Content type 'application/x-gzip' length 50...

Dear Team, Maybe somebody already tried to install mpfr and gsl packages for R on SLES. Exactly I try to install Rmpfr_0.6-1.tar.gz and gsl_1.9-10.3.tar.gz on SLES11 SP4. These are the available packages from official SLES SDK media: rtest:/home/ruser # rpm -qa | grep -i gsl gsl-devel-1.11-1.30 gsl-1.11-1.30 rtest:/home/ruser # As I understand gsl is f...

Newbie here (to R) and running Linux... > install.packages("gsl","~/R") ... trying URL 'http://cran.wustl.edu/src/contrib/gsl_1.8-4.tar.gz' Content type 'application/x-tar' length 57051 bytes opened URL ================================================== downloaded 55Kb * Installing *source* package 'gsl' ... checking for...

On 22 November 2007 at 20:00, leviwaldron at gmail.com wrote: | Full_Name: Levi Waldron | Version: 2.5.1 | OS: Ubuntu Gutsy | Submission from: (NULL) (206.248.157.88) | | | I installed libgsl0-dev then tried to install the gsl cran package, | unsuccessfully (see output below). As a workaround I created a symbolic link to | /usr/bin/gcc-4.2, ie: | | sudo ln -s /usr/bin/gcc-4.1 /usr/bin/gcc-4.2 I would strongly advise not to do that. | The correct behavior of the gsl package should b...

I am developing an R package, eiR, which depends on another C library, GNU scientific library (GSL). In order to make life easier for the user, it would be nice to not have this as an external dependency, thus I would like to wrap this library in another R package, say GSLR for example. Thus far I know how to do this. The C code in eiR requires the .so library and the header files from GSL i...

...then I get this error Error in .C("integral", sumInMean, sumInVar, boundError, numberSampleClasses, : C/Fortran function name not in load table The code of the function is something like this: #include <cmath> extern "C" { #include "/usr/local/include/gsl/gsl_statistics_double.h" #include "/usr/local/include/gsl/gsl_randist.h" #include "/usr/local/include/gsl/gsl_roots.h" #include "/usr/local/include/gsl/gsl_sf_erf.h" #include "/usr/local/include/gsl/gsl_math.h" #include "/usr/local/include/gsl/gsl_i...