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2007 Aug 31
1
locales and readLines
..., but the user has a
UTF-8 locale (or I guess more generally when the input locale does not
match R's). Here are two examples from the Bioconductor help list:
https://stat.ethz.ch/pipermail/bioconductor/2007-August/018947.html
(the relevant command is library(GEOquery); gse <- getGEO('GSE94'))
https://stat.ethz.ch/pipermail/bioconductor/2007-July/018204.html
I think solutions are:
* Specify the encoding in readLines.
* Convert the input using iconv.
* Tell the user to set their locale to match the input file (!)
Unfortunately, these (1 & 2, anyway) place extra burden on...