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2011 Aug 08
1
read in cel file by ReadAffy and read.celfile
...works, > x<-read.celfile("CH1.CEL") > str(x) List of 6 $ HEADER :List of 9 ..$ cdfName : chr "Axiom_GW_ASI_SNP" ..$ CEL dimensions : int [1:2] 1190 1190 ..$ GridCornerUL : int [1:2] 0 0 ..$ GridCornerUR : int [1:2] 1189 0 ..$ GridCornerLR : int [1:2] 1189 1189 ..$ GridCornerLL : int [1:2] 0 1189 ..$ DatHeader : chr "" ..$ Algorithm : chr "HT Image Calibration Cell Generation" ..$ AlgorithmParameters: chr "Percentile:75;CellMargin:4;OutlierHigh:1.500000;OutlierLow:1.0040...