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gregory
2006 Mar 22
0
[Fwd: Re: levels for list and data.frame]
I unintentionally missed to cc to r-devel.
-------- Original Message --------
Subject: Re: [Rd] levels for list and data.frame
Date: Tue, 21 Mar 2006 20:50:21 +0100
From: Gregor Gorjanc <gregor.gorjanc at gmail.com>
Reply-To: gregor.gorjanc at gmail.com
To: Martin Maechler <maechler at stat.math.ethz.ch>
References: <441F2C49.8080703 at gmail.com>
<17439.50351.172900.987055 at stat.math.ethz.ch>
Martin Maechler wrote:
> Hi Gregor,
>
> bef...
2002 Oct 05
2
Question on "base directory"
Hi,
I've read the manpage, but I got a simple question on the expression "base
directory" used in the "exclude patterns"-section.
When I synchronize ie:
rsync -avzu /home/gregor/ notebook:/home/gregor/
and want to use an exclude-pattern: --exclude "/foo", what is the base
directory?
The manpage's explanation is following: --exclude "/foo" would exclude a file
in the base directory called foo
Is the so called "base directory":
1) "...
2006 Mar 20
2
levels for list and data.frame
...mp <- tmp[!tmp1]
+ }
+ return(tmp)
+}
+
+levels.data.frame <- function(x, ...)
+{
+ return(levels.list(x, ...))
+}
+
nlevels <- function(x) length(levels(x))
"levels<-" <- function(x, value) UseMethod("levels<-")
--
Lep pozdrav / With regards,
Gregor Gorjanc
----------------------------------------------------------------------
University of Ljubljana PhD student
Biotechnical Faculty
Zootechnical Department URI: http://www.bfro.uni-lj.si/MR/ggorjan
Groblje 3 mail: gregor.gorjanc <at> bfro.uni-lj.si
SI-1230 Domz...
2005 Mar 25
4
Gmail invitation
Hello R users!
I just found out that I have 49 invitations for Gmail (gmail.google.com).
I have been using it now for a while and is really nice. Don't forget
1 GB for free.
I will invite those who respond to this mail by FIFO.
--
Lep pozdrav / With regards,
Gregor Gorjanc
------------------------------------------------------------------------
University of Ljubljana
Biotechnical Faculty URI: http://www.bfro.uni-lj.si/MR/ggorjan
Zootechnical Department email: gregor.gorjanc <at> bfro.uni-lj.si
Groblje 3 tel: +386 (0)1 72 17 8...
2005 Feb 07
2
Programming/scripting with "expressions - variables"
...urse a silly one but
shows what I don't know how to do in R.
%macro test(data, colname, colvalue);
data &data;
...
&colname="&colvalue";
other_&colname="other_&colvalue";
run;
%mend;
And if I run it with this call:
%test(Gregor, Gorjanc, 25);
I get a table with name 'Gregor' and columns 'Gorjanc',
and 'other_Gorjanc' with values:
Gorjanc other_Gorjanc
"25" "other_25"
So can one show me the way to do the same thing in R?
Thanks!
--
Lep pozdrav / With regards,
Gregor...
2003 Feb 18
2
Include files though directory excluded
Hi,
I got a little question on the rsync-option include/exclude:
I excluded all hidden files in my home-directory but I want two files to be
included. I used following command:
gregor@notebook:~> rsync -avzuPn -e ssh --exclude=.* --exclude=*
--include=.kderc --include=.gaimrc /home/gregor/ 192.168.0.1:/home/gregor/
building file list ...
1 file to consider
wrote 69 bytes read 20 bytes 178.00 bytes/sec
total size is 0 speedup is 0.00
gregor@notebook:~>
Why this transfe...
2006 Jul 02
4
Test for argument in ...
...if arg1 was given in foo1. Is it possible to test whether some argument
was passed in "..." i.e. something like
foo1 <- function(x, ...)
{
if(testForArgumentInThreeDots(arg1)) arg1 <- "some value"
foo2(x, arg1=arg1, ...)
}
Thanks!
--
Lep pozdrav / With regards,
Gregor Gorjanc
----------------------------------------------------------------------
University of Ljubljana PhD student
Biotechnical Faculty
Zootechnical Department URI: http://www.bfro.uni-lj.si/MR/ggorjan
Groblje 3 mail: gregor.gorjanc <at> bfro.uni-lj.si
SI-1230 Domz...
2007 May 19
4
GPG key for Ubuntu packages
Hi!
Is anyone experiencing the following:
$ gpg --keyserver subkeys.pgp.net --recv-key E2A11821
gpg: requesting key E2A11821 from hkp server subkeys.pgp.net
gpg: keyserver timed out
gpg: keyserver receive failed: keyserver error
Regards, Gregor
2005 Feb 22
6
Run Sweave and LaTeX directly from command line
...llo!
Those of you, who use Sweave a lot, will probably find my shell script
usable. You can get it at:
http://www.bfro.uni-lj.si/MR/ggorjan/programs/shell/Sweave.sh
No warranty, however don't hesitate to contact me if you find an error or
have a patch!
--
Lep pozdrav / With regards,
Gregor GORJANC
---------------------------------------------------------------
University of Ljubljana
Biotechnical Faculty URI: http://www.bfro.uni-lj.si
Zootechnical Department mail: gregor.gorjanc <at> bfro.uni-lj.si
Groblje 3 tel: +386 (0)1 72 17 861
SI-1230 Domzale...
2005 Apr 24
1
R CMD check doesn't stop with checking examples
...ne if I compile it as a shared library and load it into
R via dyn.load(). However, when I launch R CMD check it doesn't stop
with checking examples. It's just doing and doing ... I pasted the
whole output from R CMD check. Does anyone have any suggestions?
I'm still using R 2.0.1.
C:\Gregor\devel\GeneticsPed>Rcmd check GeneticsPed
* checking for working latex ... OK
* using log directory 'C:/Gregor/devel/GeneticsPed/GeneticsPed.Rcheck'
* checking for file 'GeneticsPed/DESCRIPTION' ... OK
* checking if this is a source package ... OK
installing R.css in C:/Gregor/de...
2002 Aug 27
4
Strange MS-Access Problems with Samba 2.2.1a
...nk the problem
is Samba cause in the database file you can find some log entries from
samba. I got some tips from a german ng but I think it is better to publish
it here cause might be a bug in samba 2.2.1a.
I use samba 2.2.1a on Suse 7.3 and MS Office 2000 with service pack 2 on
WIN98 SE
greetings
Gregor
Parts of the destroyed database file:
--snip--
@^A^@^G^D^@^D^@^@^@^@^@^F^@??^L^@
^@^A^@^G^D^@^C^@^@^@^@^@^F^@??^L^@
^@^A^@^G^D^@^B^@^@^@^@^@^F^@??^L^@
^@^A^@^G[2002/08/15 10:18:43, 2] smbd/open.c:open_file(216)
GREGOR opened file Access-Datenbank/db1.mdb read=Yes write=No (numopen=2)
[2002/08/15...
2004 Dec 31
4
R-intro
...t;)
suggestion
mm <- data(morley)
rm(fm, fm0)
suggestion
rm(fm, fm0, mm)
objects(); rm(x, y, f, fa)
suggestion
objects(); rm(x, y, f, fa, oldpar)
It might also be usefull to use # for comments, since it is easier to
copy&paste to R terminal from manual.
--
Lep pozdrav / With regards,
Gregor GORJANC
---------------------------------------------------------------
University of Ljubljana
Biotechnical Faculty URI: http://www.bfro.uni-lj.si
Zootechnical Department email: gregor.gorjanc <at> bfro.uni-lj.si
Groblje 3 tel: +386 (0)1 72 17 861
SI-1230 Domzale...
2007 Sep 19
5
How to test if R is running on a Mac
Hi!
Is there any way to test if R is running on a Mac? I usually use
value of .Platform$OS.type for windows or unix, but Mac falls in the
latter group.
Thanks, Gregor
2005 Feb 23
4
Sweave and \input or \include LaTeX commands
...ommands. So, is it aware of such a possible hierarchy in
documents. I would test that, but I don't have such a report
available at the moment.
I thought of that when I was writting shell script for Sweave
from command line and I have solved that part there.
--
Lep pozdrav / With regards,
Gregor GORJANC
---------------------------------------------------------------
University of Ljubljana
Biotechnical Faculty URI: http://www.bfro.uni-lj.si
Zootechnical Department email: gregor.gorjanc <at> bfro.uni-lj.si
Groblje 3 tel: +386 (0)1 72 17 861
SI-1230 Domzale...
2005 Jan 05
5
Converting integers to chars i.e 1 to "01"
...imple function (see below),
but I do not know how this limit stuff can be imporved to work really well
with default. Any suggestions?
int2char <- function(x, limit = max(x)) {
# Description:
# Converts integer to character such that numbers bellow limit get 0 in
# front
# Gregor GORJANC, 2005-01-05
# Arguments:
# x: vector of numbers
# limit: limit up to which numbers should get 0 in front, default
# max(x)
# Examples:
# a <- seq(0, 20, 1)
# int2char(a) # this does not work OK
# int2char(a, limit = 10) # this does work OK...
2008 Sep 26
2
ANOVA between & within variance
hi,
is there an option to calculate the 'within' & 'between' group variances
for a simple ANOVA (aov) model (2 groups, 1 trait, normally distr.) ?
or do I have to calculate them from the Sum Sq ?
thanks for your time and greetings,
gregor
--
Gregor Rolshausen
PhD Student; University of Freiburg, Germany
e-mail: gregor.rolshausen at biologie.uni-freiburg.de
tel. : ++49 761 2032559
2005 May 08
2
Extract just some fields from XML
...could get anything usable from it. Here is something not
very usable ;)
PubDate <- function(x, ...)
{
print(x)
}
xmlEventParse(URL, isURL = TRUE,
handlers=list(PubDate=PubDate),
addContext = FALSE)
Thanks in advance!
Lep pozdrav / With regards,
Gregor Gorjanc
----------------------------------------------------------------------
University of Ljubljana
Biotechnical Faculty URI: http://www.bfro.uni-lj.si/MR/ggorjan
Zootechnical Department mail: gregor.gorjanc <at> bfro.uni-lj.si
Groblje 3 tel: +386 (0)1 72 17 8...
2004 Nov 12
4
How to get mode (the most frequent value in distribution)?
...d other
basic thing but not mode function. Can anyone help?
I know there my might be problems with multiple modes, but still I think
that there should be a mode function in R.
Please send mail to R-help list and me, so I can get response faster.
Thank you!
--
Lep pozdrav / With regards,
Gregor GORJANC
---------------------------------------------------------------
University of Ljubljana
Biotechnical Faculty URI: http://www.bfro.uni-lj.si
Zootechnical Department mail: gregor.gorjanc <at> bfro.uni-lj.si
Groblje 3 tel: +386 (0)1 72 17 861
SI-1230 Domzale...
2006 Feb 10
8
Fitdistr and MLE for parameter lambda of Poisson distribution
...n(x)
sds <- sqrt(estimate/n)
Is this MLE? With my poor math/stat knowledge I thought that MLE for
Poisson parameter is (in mixture of LaTeX code)
l(\lambda|x) \propto \sum^n_{i=1}(-\lambda + x_iln(\lambda)).
Is this really equal to (\sum^n_{i=1} x_i) / n
--
Lep pozdrav / With regards,
Gregor Gorjanc
----------------------------------------------------------------------
University of Ljubljana PhD student
Biotechnical Faculty
Zootechnical Department URI: http://www.bfro.uni-lj.si/MR/ggorjan
Groblje 3 mail: gregor.gorjanc <at> bfro.uni-lj.si
SI-1230 Dom...
2007 Sep 27
14
Camping and ruby2ruby
...ng arguments
raises the error (div.class_name, div(:rel => "options"), ...).
I don''t know where the :href attribute comes from and I don''t know,
why it only appears within camping and not in markaby itself.
Any help would be appreciated. Thanks in advance.
Cheers,
Gregor
Note: I''m using the latest release of camping (1.5.180), markaby (0.5)
and ruby2ruby (1.1.7)