search for: gplot

Dear all, I have an issue trying to install new packages (have tried with RODBC_1.3-1, gplots_2.6.1, gtools_2.7.4 packages) and get the same error message : "Error in library(gplots) : there is no package called 'gplots'" Only clue I have found so far on the Web is related to Perl (Perl modules are installed on my computer, but which one is related to gplots if any ?); n...

Hello all, I use R on both windows and a "mainframe" linux installation (RedHat enterprise 3.0, which they tell me is soon to be upgraded to 4.0). On windows I installed the package gplots without trouble, and it works fine. When I attempted to do the same on the unix computer, the following error message was forthcoming: downloaded 216Kb * Installing *source* package 'gplots' ... ** R ** data ** inst ** preparing package for lazy loading Loading required package: gto...

Dear R community, I am using R version 2.4.1 GUI 1.18 on an iBook G4 with OS 10.4.10. When I try to load package 'gplots' I get the following message: > library(gplots) Loading required package: gdata Attaching package: 'gdata' The following object(s) are masked _by_ .GlobalEnv : reorder.factor Loading required package: gtools Attaching package: 'gtools' The following object(s) a...

I had installed de "gplots" package and then I loaded the library but the package did not work. I recieved a message like this: > install.packages("gplots", dependencies = TRUE) Installing package(s) into ‘/home/fpiston/R/x86_64-pc-linux-gnu-library/2.14’ (as ‘lib’ is unspecified) --- Please select a CRA...

The issue shows when installing some packages. I was interested in using "gplots" so i ran: install.packages("gplots", dependencies=TRUE) and the outcome was something like this: Aviso en install.packages("gplots", dependencies = TRUE) : argument 'lib' is missing: using '/home/buscoverdad/R/i686-pc-linux-gnu-library/2....

When I try to install the ROCR package (which requires gplots) on Ubuntu 9.10 (Xubuntu Karmic Koala) 64-bit on R version 2.9.2 (2009-08-24), it eats up all my RAM (2GB) and swap (4GB) and keeps allocating more memory until Linux's out of memory (OOM) killer kills the perl process. This problem is special to Ubuntu because I can install other packages (s...

Hi all, I couldn't install gplots package. > install.packages("gplot") Warning message: package 'gplot' is not available (for R version 3.0.2) i want to use heat maps.2 function. can you please tell me how to install this package or are there any alternatives. Thanks in advance :) [[alternative HTML versi...

...et an error "Error: invalid graphics state" when trying to save as pdf and I have to restart R. This happens when I add mtext lines. There are a few other questions e.g. I want to move the mtext on side 1 to the left, but that is the main issue for now. I'm not using the ylab inside gplot.hexbin because it writes over the numbers on the axis. The file is 33k records but I could get a subset and paste in here if people need that to resolve the issue. the code par(oma=c(3,3.5,3,1)) par(mar=c(2, 4, 0, 0)) plot.new() gplot.hexbin(h, style = "colorscale", colramp = funct...

Hi, I just installed Ubuntu 12.04.4. I installed R by following instructions from CRAN after modification into my /etc/apt/sources.list file sudo apt-get update sudo apt-get install r-base sudo apt-get install r-base-dev When I try to load library(gdata) ou library(gplots), I have error message : library(gdata) gdata: read.xls support for 'XLS' (Excel 97-2004) files ENABLED. gdata: read.xls support for 'XLSX' (Excel 2007+) files ENABLED. Attachement du package : ?gdata? L'objet suivant est masqu? from ?package:stats?: nobs L'obj...

Hi everyone! I get the following message anyhow I try to load the package gplots: Error in lazyLoadDBfetch(key, datafile, compressed, envhook) : ReadItem: unknown type 241 Error in library(pkg, character.only = TRUE) : package/namespace load failed for 'gplots' Could any of you tell me what goes wrong? (I am using R 2.0.1. on Windows) Thanks a lot:...

Hi all, i installed the ggplot2 package via install.packages(), but the gplot function was not recognized in R console command. Is there any paths to configure? The error message reports that the function was not found. Thanks Ricardo ____________________________________________________________________________________...

I have a revised version of the gregmisc package, which I've converted into a package bundle each of which has a namespace: gplots, gmodels, gdata, gtoools. Of course, there are interdependencies among these namespaces: gsun374: /tmp [11]> cd gregmisc/ gsun374: gregmisc [12]> grep import */NAMESPACE gdata/NAMESPACE:importFrom(gtools, odd, invalid, mixedsort) gmodels/NAMESPACE:importFrom(MASS, ginv) gplots/NAMESP...

Hi, I have some data which I was plotting using image(). I wanted to add a vertical color key to the plot and I found that heatmap.2 in gplots does let me add a color key. However, I was thinking of a vertical bar with the color range rather than the style that gplots provides. Is there any package (or code snippet) that would let me add a vertical color key to an image() or heatmap plot? Thanks, -------------------------------...

Dear all, I have installed R using yum install R-2.9. I am able to use R for general functions but when I installed some library say gplots I am getting the below error. > install.packages("gplots") Warning in install.packages("gplots") : argument 'lib' is missing: using '/home/fedora/R/i386-redhat-linux-gnu-library/2.11' Warning: unable to access index for repository http://cran.csdb.cn/src/c...

Hello, I'm fairly new to R and am running version 2.11.0 with Windows 7. I need to run the package gplots. The package installs fine, but when I try to load it I receive the message: Loading required package: gtools Error: package 'gtools' could not be loaded In addition: Warning message: In library(pkg, character.only = TRUE, logical.return = TRUE, lib.loc = lib.loc) : there is no packa...

hi all i'm trying to open gplots library but i keep on getting this error: /Loading required package: gdata Error in readRDS(mapfile) : embedded nul in string: 'ref\0\0\002\0\0\0\0' Error : unable to load R code in package ?gdata? Error: package ?gdata? could not be loaded/ if i run session info the results are: /> p...

I am having difficulty installing packages. For example, here I have tried to install "gplots" but to no avail. I have tried multiple mirrors and different packages (errbar) but after installation I seem to be unable to access any of the commands or help pages. I am a little concerned about the 'lib' missing message but this has been present for previous successful package ins...

Hi all, I am taking this over from r-help (see http://permalink.gmane.org/gmane.comp.lang.r.general/273985). I experience a segfault when calling gplots::heatmap.2(), but only when certain other packages are loaded. I am not sure for the correct place to send this bug report. Should I send it to the package maintainers directly? If R-help is the wrong place, please feel free to direct me to the correct one. I am on debian (testing) linux 64 wi...

Hi, Would like to use to the hexbin package to plot a 2D hist - because it looks really _cool_. My problem is related to drawing a pdf hexbin graphic in series of other graphics. All other figures have a par(mar=c(3.2,3.2,1,1)). So the gplot.hexbin figure in this series looks a little alienated? Was trying a to specify the _mar_ using par, viewport, hexViewport etc. a little. My question. How to set the margins in the sample code below. x <- rnorm(10000) y <- rnorm(10000) bin <- hexbin(x,y) ## Plot : Note that 'gplot...

Hi All, I'd like to see the function code behind the barplots2() function in the gplots package, however i come across a bit of a stumbling block of a hidden function, can anyone help? > library(gplots) > methods(barplot2) [1] barplot2.default* Non-visible functions are asterisked > barplot2 function (height, ...) UseMethod("barplot2") <environment: namespa...