Displaying 3 results from an estimated 3 matches for "gm930040".
2010 Mar 08
1
compare tables
...0430" "CCCC"
[14,] "GM920224" "WI920369" "CCCC"
[15,] "GM920224" "WI920352" "CCCC"
[16,] "GM960028" "WI920427" "CCCC"
[17,] "GM940031" "WI920004" "CCCC"
[18,] "GM930040" "WI920441" "CCCC"
[19,] "GM930040" "WI920441" "CCCC"
[20,] "GM050099" "WI920417" "CCCC"
[21,] "GM050099" "WI920423" "CCCG"
[22,] "GM920096" "WI920370" "CCCC&q...
2010 May 19
1
sample and rearrange
...olumn,
all the second letters in a second column, all the third ones in a
third column and so on, resulting in 7 columns,
i.e. for the first individual (GM920222) GGGG AAAA TTTT TTAA GGGG CCAA
CCCC ?
Thank you very much,
Laetitia
SampleID A1 A2 A3 A4
GM920222 GATTGCC GATTGCC GATAGAC GATAGAC
GM930040 GTCATCA GAGTGCA ACTATAA GATTGCC
GM930040 GTCATCA GAGTGCA ACTATAA GATTGCC
GM960023 GATTGCC GTCATCA GATTGCC GATTGCC
GM920224 ACTAGAA GTCATCA GTCATCA ACTAGAA
GM920224 ACTAGAA GTCATCA GTCATCA ACTAGAA
GM920034 GATTGCC GTCATCA GATTGCA GATTGCA
GM920096 GATTGCC GATTGCC GATTGCA GATTGCC
GM930029 GTCATCA GATT...
2010 May 16
2
sample
...2:5],2),sample(dads[rdad,2:5],2))
output_offspring<-rbind(output_offspring,c(moms$SampleID[i],dads
$SampleID[rdad],kid))
}
write
.table
(output_offspring,"offspring_7.txt",row.names=T,col.names=T,quote=F)
females.txt:
SampleID A1 A2 A3 A4
GM920222 GATTGCC GATTGCC GATAGAC GATAGAC
GM930040 GTCATCA GAGTGCA ACTATAA GATTGCC
GM930040 GTCATCA GAGTGCA ACTATAA GATTGCC
GM960023 GATTGCC GTCATCA GATTGCC GATTGCC
GM920224 ACTAGAA GTCATCA GTCATCA ACTAGAA
GM920224 ACTAGAA GTCATCA GTCATCA ACTAGAA
GM920034 GATTGCC GTCATCA GATTGCA GATTGCA
GM920096 GATTGCC GATTGCC GATTGCA GATTGCC
GM930029 GTCATCA GATT...