search for: gln

...fn.1 <- function(p){ for (i1 in ilong){ ff <- f[i1] ex[i1] <- exp(S*n*L*voigt(u,v,ff,p[1],p[2],p[3])[[1]]) } sum((t-ex)^2) } out <- nlm(fn.1, p = c(fo, GG, GL), hessian = TRUE, steptol = 1e-5, iterlim = 1000) foN <- out$estimate[1] GGN <- out$estimate[2] GLN <- out$estimate[3] This works fine but the my start value of S is to poor, so I like to fit S in a second run, with the initial values from the first run (two runs because I know that S as an parameter is an problem): fn.2 <- function(p){ for (i1 in ilong){ ex[i1] <- exp(p[...

...d. If there is a lot of interest then I will submit it to CRAN. I know that Ross Ihaka is working on a new version for R, which does not have some of the limitations of the original S version. My version does not do projections or thinning but will accept the standard S[-Plus] database files (*.[GLN]). Ray Brownrigg -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html Send "info", "help", or "[un]subscribe" (in the "body", not the subject !) To: r-hel...

I have a question in R. In directory H:/Delta_angle I have 19 files like this: ALA.delta ASN.delta ASP.delta CYS.delta GLN.delta GLU.delta HIS.delta ILE.delta LEU.delta LYS.delta MET.delta PHE.delta PRO.delta SER.delta THR.delta TRP.delta TYR.delta VAL.delta I want to read these files to 19 data sets in R. All these data sets have "P","AA",index","delta" columns I want to do histogra...

...dataset, and assign to pr. in p1982, p has 1982 levels, in dataset pr, p should have 1 levels. But I do str(pr), it shows that p still has 1982 levels. also for these > pr$aa [1] ARG THR ASP CYS TYR ASN VAL ASN ARG ILE ASP THR THR ALA SER CYS LYS THR ALA LYS Levels: ALA ARG ASN ASP CYS GLN GLU HIS ILE LEU LYS MET PHE PRO SER THR TRP TYR VAL it seems pr$aa don't have level GLU, but it list this level. I don't understand this, Is there some reason for these? thanks, > str(p1982) 'data.frame': 465979 obs. of 6 variables: $ p : Factor w/ 1982 levels &quot...

Dear R-helpers: thank your for your attention. i am a newer to R and i am doing some protein category classification based on the amino acid sequence.while i have some questions urgently. 1. any packages for analysis amino acid sequence 2. given two sequences "AAA" and "BBB",how can i combine them into "AAABBB" 3. based on "AAABBB",how can i get some

I'm on an Arch Linux system: $ uname -a Linux wink-desktop 5.0.4-arch1-1-ARCH #1 SMP PREEMPT Sat Mar 23 21:00:33 UTC 2019 x86_64 GNU/Linux My gpg version is: $ gpg --version gpg (GnuPG) 2.2.15 libgcrypt 1.8.4 Copyright (C) 2019 Free Software Foundation, Inc. License GPLv3+: GNU GPL version 3 or later < https://gnu.org/licenses/gpl.html> This is free software: you are free to change and