Displaying 8 results from an estimated 8 matches for "glm3".
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2002 May 16
1
glm(y ~ -1 + c, "binomial") question
...ts the dichotomized
outcome. The glm1 model (see below) is the same as glm2 (2 dummy
variables coding sever and mild). In both models the reference
level is profound disability.
My questions are:
1. How do I interpret the coefficients in the third model (the
intercept is removed)?
2. Does glm3 make sense? Does anyone ever want to construct a
model like glm3? If so, when?
3. What is the algebraic specification of glm3?
Many thanks,
-- Yuelin Li.
-------------------
categ <- factor(rep(c(1, 2, 3), times=c(20, 20, 20)),
labels=c("P", "S", &quo...
2002 Apr 30
1
MemoryProblem in R-1.4.1
...irst works, for the second one it is:
Error: cannot allocate vector of size 3 Kb
In addition: Warning message:
Reached total allocation of 255Mb: see help(memory.size)
So I increase the memory
> memory.limit(size=300)
NULL
> out2<-lapply(list.glm2, myfun) #works
> out3<-lapply(list.glm3, myfun) #does not works
Error: cannot allocate vector of size 31 Kb
In addition: Warning message:
Reached total allocation of 300Mb: see help(memory.size)
Again I increase the memory.size
> memory.limit(size=320)
NULL
> out3<-lapply(list.glm3, myfun) #works!
> out4<-lapply(list.glm4...
2003 Feb 28
1
summary.glm() print problem(?) with cor = TRUE
...*' 0.95 `B' 1
I'm not worried about the symbolic representation, but should the columns be
labelled this way? I can work out which is which, but it isn't immediately
clear and doesn't look "nice". Is this printing intended?
Because when I do:
print(summary(species.glm3, correlation = TRUE), symbolic.cor = FALSE)
I get a much more nicely formatted correlation matrix:
Correlation of Coefficients:
(Intercept) pH I(pH^2) Ca
pH -0.9321
I(pH^2) 0.9233 -0.9968
Ca 0.1442 -0.4893 0.4950...
2006 Aug 31
1
NaN when using dffits, stemming from lm.influence call
...ee my problem easily. But if I must...
The appearance of the NaN seems odd, since (as I understand it)
lm.influence(dep.glm2)$sigma computes sigma when each observation
is removed in turn. So if I remove Observation 3 and try fitting the
model, there are no problems or complaints:
dep.glm3 <- glm( Counts ~ factor(Depression) + factor(SLE) +
factor(Children) + factor(Depression):factor(SLE),
family=poisson( link=log), subset=(-3) )
This produces:
> dep.glm3
Call: glm(formula = Counts ~ factor(Depression) + factor(SLE) +
factor(Children) + factor(Depression):...
2002 Jan 02
0
comparative rendering of modeling outputs
...results of multiple linear model fits in formats
suitable for presentation in applications contexts.
An extract from the output of 'example(cremo)':
cremo> data(stackloss)
cremo> attach(stackloss)
cremo> glm2 <- glm(stack.loss ~ Air.Flow + Water.Temp + Acid.Conc.)
cremo> glm3 <- glm(stack.loss ~ Air.Flow + Water.Temp)
cremo> glm4 <- glm(stack.loss ~ Air.Flow * Water.Temp)
cremo> try(print(cremo(list(glm2, glm3, glm4), adeqel = c("deviance",
"aic")), quote = F))
var Model 1 Model 2 Model 3
[1,] (Intercept)...
2006 Mar 16
2
DIfference between weights options in lm GLm and gls.
...9000
Residual Deviance: 28210 AIC: 7414
> glm2
Call: glm(formula = y ~ x, weights = W)
Coefficients:
(Intercept) x
0.1955 7.3053
Degrees of Freedom: 1242 Total (i.e. Null); 1241 Residual
Null Deviance: 1548000
Residual Deviance: 44800 AIC: 11670
> glm3
Call: glm(formula = y ~ x, weights = 1/W)
Coefficients:
(Intercept) x
0.03104 7.31033
Degrees of Freedom: 1242 Total (i.e. Null); 1241 Residual
Null Deviance: 798900
Residual Deviance: 19900 AIC: 5285
> glm4
Call: glm(formula = ys ~ Xs - 1)
Coefficients:...
2004 Aug 19
1
The 'test.terms' argument in 'regTermTest' in package 'survey'
This is a question regarding the 'regTermTest' function in the 'survey' package. Imagine Z as a three level factor variable, and code ZB and ZC as the two corresponding dummy variables. X is a continuous variable. In a 'glm' of Y on Z and X, say, how do the two test specifications
test.terms = c("ZB:X","ZC:X") # and
test.terms = ~ ZB:X + ZC:X
in
2003 Apr 24
2
R-1.7.0 build feedback: NetBSD 1.6 (PR#2837)
R-1.7.0 built on NetBSD 1.6, but the validation test suite failed:
Machinetype: Intel Pentium III (600 MHz); NetBSD 1.6 (GENERIC)
Remote gcc version: gcc (GCC) 3.2.2
Remote g++ version: g++ (GCC) 3.2.2
Configure environment: CC=gcc CXX=g++ LDFLAGS=-Wl,-rpath,/usr/local/lib
make[5]: Entering directory `/local/build/R-1.7.0/src/library'
>>> Building/Updating