search for: girondot

...e loops to gain in performance I try this and it works but again I have a while and then I do not eliminate completely loop: l <- length(a) while(any(is.na(a))) {a[2:l] <- ifelse(is.na(a[2:l]), a[1:(l-1)], a[2:l])} If someone have another solution, I will be most happy ! Sincerely Marc Girondot -- __________________________________________________________ Marc Girondot, Pr Laboratoire Ecologie, Syst?matique et Evolution Equipe de Conservation des Populations et des Communaut?s CNRS, AgroParisTech et Universit? Paris-Sud 11 , UMR 8079 B?timent 362 91405 Orsay Cedex, France Tel: 33 1 (...

Hi Marc That's a workaround I can use. Thanks. I'm a newbie regarding netCDF data. Is there any information I'm losing when switching between the packages? Raphael Von: Marc Girondot [mailto:marc.girondot at u-psud.fr] Gesendet: Mittwoch, 2. August 2017 15:13 An: Felber Raphael Agroscope <raphael.felber at agroscope.admin.ch> Betreff: Re: AW: [R] Remove attribute from netcdf4 object ok. Sorry, I didn't understood good. I don't think you can do it in ncdf4 functio...

...on 2.15.2 (2012-10-26) * using platform: i386-apple-darwin9.8.0 (32-bit) * using session charset: UTF-8 * checking for file ?phenology/DESCRIPTION? ... OK * checking extension type ... Package * this is package ?phenology? version ?3.43? * checking CRAN incoming feasibility ... OK Maintainer: ?Marc Girondot <marc.girondot at u-psud.fr>? * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... O...

...ing the dgamma of r par(new=TRUE) plot(x, dgamma(x, shape=jagsr, rate=jagsmu), type="l", axes=FALSE, col="red", xlab="", ylab="") Probably something trivial is wrong but I do not see what. -- __________________________________________________________ Marc Girondot, Pr Laboratoire Ecologie, Syst?matique et Evolution Equipe de Conservation des Populations et des Communaut?s CNRS, AgroParisTech et Universit? Paris-Sud 11 , UMR 8079 B?timent 362 91405 Orsay Cedex, France Tel: 33 1 (0)1.69.15.72.30 Fax: 33 1 (0)1.69.15.73.53 e-mail: marc.girondot at u-psud.f...

Dear all For a model I need to combine several netCDF files into one (which works fine). For better overview I'd like to delete/remove some of the attributes. Is there a simple way doing this? I'm using the package netcdf4, which creates an object of class(nc) = "ncdf4". It seems that for earlier versions of netcdf objects, there was the function att.delete.nc{RNetCDF}. But

...] "2000-04-13" "2000-05-03" "2000-05-23" "2000-06-12" "2000-07-02" Is not what I expected. Plot with date object seems to use a special way to generate ticks. Thanks a lot Marc -- __________________________________________________________ Marc Girondot, Pr Laboratoire Ecologie, Syst?matique et Evolution Equipe de Conservation des Populations et des Communaut?s CNRS, AgroParisTech et Universit? Paris-Sud 11 , UMR 8079 B?timent 362 91405 Orsay Cedex, France Tel: 33 1 (0)1.69.15.72.30 Fax: 33 1 (0)1.69.15.73.53 e-mail: marc.girondot at u-psud.f...

...r : .onLoad a ?chou? dans loadNamespace() pour 'RNetCDF', d?tails : appel : NULL erreur : I/O error (udunits) Erreur : le chargement du package ou de l'espace de noms a ?chou? pour ?RNetCDF? Anybody have some info about what's happened ? In MacOSX 10.8.3, R3.0.0 Sincerely, Marc Girondot -- __________________________________________________________ Marc Girondot, Pr Laboratoire Ecologie, Syst?matique et Evolution Equipe de Conservation des Populations et des Communaut?s CNRS, AgroParisTech et Universit? Paris-Sud 11 , UMR 8079 B?timent 362 91405 Orsay Cedex, France Tel: 33 1 (...

...at all packages are not available. Until now I found one missing for OSX among these I used: maptools Is there a list of packages that were available in CRAN for 2.15 version and no more available ? And thanks a lot for all the programmers and maintainers for this great software. Sincerely, Marc Girondot -- __________________________________________________________ Marc Girondot, Pr Laboratoire Ecologie, Syst?matique et Evolution Equipe de Conservation des Populations et des Communaut?s CNRS, AgroParisTech et Universit? Paris-Sud 11 , UMR 8079 B?timent 362 91405 Orsay Cedex, France Tel: 33 1 (...

Dear Marc Thanks for your remark. I don't want to use both packages. I mentioned the package RNetCDF to show that there is a similar function I' d like to use. Raphael Von: Marc Girondot [mailto:marc.girondot at u-psud.fr] Gesendet: Mittwoch, 2. August 2017 14:51 An: Felber Raphael Agroscope <raphael.felber at agroscope.admin.ch>; r-help at r-project.org Betreff: Re: [R] Remove attribute from netcdf4 object Le 02/08/2017 ? 12:03, raphael.felber at agroscope.admin.ch<mailt...

...ile is located > setwd("...") > package.skeleton("HelloWorld",code_files=c("HelloWorld.R")) # to generate .rd files > library("roxygen2") > roxygenize("HelloWorld",copy.package=FALSE) > system("R CMD build '/Users/marcgirondot/Documents/Espace de travail R/Phenology/Source fit/Essai_package/HelloWorld'") * checking for file ?/Users/marcgirondot/Documents/Espace de travail R/Phenology/Source fit/Essai_package/HelloWorld/DESCRIPTION? ... OK * preparing ?HelloWorld?: * checking DESCRIPTION meta-information ... OK...

...ients: factor 2.034848 Intercepts: a|f f|m -16.306511 2.632410 Residual Deviance: 106.2304 AIC: 112.2304 whereas the corresponding scaled deviance for the binomial model (removing a column) is 1.842e-3... -- __________________________________________________________ Marc Girondot, Pr Laboratoire Ecologie, Syst??matique et Evolution Equipe de Conservation des Populations et des Communaut??s CNRS, ENGREF et Universit?? Paris-Sud 11 , UMR 8079 B??timent 362 91405 Orsay Cedex, France Tel: 33 1 (0)1.69.15.72.30 Fax: 33 1 (0)1 69 15 56 96 e-mail: marc.girondot at ese.u-psu...

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Hello, I don't know if the problem originates from R-devel 3.2 or Rcurl itself. I post this message to the R-devel list and to the author of RCurl (duncan at r-project.org). > library("RCurl") Le chargement a n?cessit? le package : bitops > print(sessionInfo()) R Under development (unstable) (2015-02-03 r67717) Platform: x86_64-apple-darwin13.4.0 (64-bit) Running under:

Hi, I'm new to R. I have some daily soil moisture data for the year 1979 in netcdf format such as these sm19790101.1.nc sm19790102.1.nc . . . sm19791231.1.nc I need to average a variable called "sm" to monthly resolution. I've done these days = formatC(1:31, width=2, flag="0") ncfiles = lapply(days, function(d){ filename = paste("sm197901", d,

...x, ...) {return(x*2)} d <- 10 class(d) <- "essai" plot(d) It works: [1] 20 attr(,"class") [1] "essai" Now same with as.numeric: as.numeric.essai <- function(x, ...) {return(x*2)} as.numeric(d) It does not work: [1] 10 Is it possible ? Thanks a lot Marc Girondot

Hi, all I have a medium sized data, 6 years. Each observation is a case with a date variable, such as '2004-08-02'. Some of the months didn't occur a case. I want to plot the 6 years data by month, and the Y_axis is the freqency of cases for each month, meaning 12*6=72 bars or points in the figure. I though of a method, 1st, using the months function, then ploting. But I need to

...en two versions of the same model (0.001841823 for glm and 106.2304 for multinom()) is due to a difference in the specification of the satured model. However, as RD=-2 Ln L model+2 Ln L saturated and that -2 Ln L model=11.1146... it seems impossible to me that RD > -2 Ln L model ... Marc Girondot Sorry to be so close-minded ! -- __________________________________________________________ Marc Girondot, Pr Laboratoire Ecologie, Syst??matique et Evolution Equipe de Conservation des Populations et des Communaut??s CNRS, ENGREF et Universit?? Paris-Sud 11 , UMR 8079 B??timent 362 91405 Orsay...

HI, I have the pattern like "`Year_Month)201103`" I want to delete single quotes within double quetes. I want to change it into "Year_Month)201103" , how to do it in r? Thanks a lot. Tammy [[alternative HTML version deleted]]

Dear all, I was wondering how to read DNA sequences in R, is there a specific function and/or a specific package for that? Thank you very much in advance, Gian ** [[alternative HTML version deleted]]

how can i draw the graph in R?