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2006 Dec 31
1
Genotype importing from Sequenom
Sequenom has an odd format of calling a SNP genotype
gg
[1] "C" "GA" "A" "C" "C" "AG" "C" "C" "T" "G"
homozygous A is called A and heterozygous is called AT
The genetics package cannot handle the fact that some genotypes are declared
with 2 letter while other are declared with only 1.