search for: gettextf

...in some cases, e.g. > library("R.utils", quietly=TRUE) Loading required package: R.methodsS3 [...] I traced this to base:::.getRequiredPackages2(), which forgets to pass 'quietly' to an internal library() call: if (!attached) { if (!quietly) packageStartupMessage(gettextf("Loading required package: %s", pkg), domain = NA) library(pkg, character.only = TRUE, logical.return = TRUE, lib.loc = lib.loc) || stop(gettextf("package %s could not be loaded", sQuote(pkg)), call. = FALSE, domain = NA) } It's from that libr...

...rmissions ... OK * checking DESCRIPTION meta-information ... OK * checking package dependencies ... OK * checking index information ... OK * checking package subdirectories ... OK * checking S3 generic/method consistency ... WARNING Erro: .First.lib failed for 'tcltk' Call sequence: 2: stop(gettextf(".First.lib failed for '%s'", libraryPkgName(package)), domain = NA) 1: library(package, lib.loc = lib.loc, character.only = TRUE, verbose = FALSE) Interrupted execution See section 'Generic functions and methods' of the 'Writing R Extensions' manual. * che...

...se of a typo in the tools:::format.check_Rd_metadata() function: format.check_Rd_metadata <- function(x, ...) { c(character(), if(length(bad <- x$files_with_duplicated_name)) { unlist(lapply(names(bad)), function(nm) { c(gettextf("Rd files with duplicated name '%s':", nm), .pretty_format(bad[[nm]])) }) }, if(length(bad <- x$files_with_duplicated_aliases)) { unlist(lapply(names(bad)), fun...

...ation, where I installed R from CRAN via pkg. Is this a problem unique to me? cheers, Mark heres' a snippet from testing one of my packages under development: * checking for unstated dependencies in R code ... WARNING Error: package/namespace load failed for ?metaGSEA? Call sequence: 2: stop(gettextf("package/namespace load failed for %s", sQuote(package)), call. = FALSE, domain = NA) 1: library(package, lib.loc = lib.loc, character.only = TRUE, verbose = FALSE) Execution halted See the information on DESCRIPTION files in the chapter ?Creating R packages? of the ?Writing R Exte...

...ile in the src directory which works if loaded with dyn.load("/data/devel/SBMLodeSolveR/SBMLodeSolveR/src/SBMLodeSolveR.so") The error/warning messages are: * checking S3 generic/method consistency ... WARNING Error: .First.lib failed for 'SBMLodeSolveR' Call sequence: 2: stop(gettextf(".First.lib failed for '%s'", libraryPkgName(package)), domain = NA) 1: library(package, lib.loc = lib.loc, character.only = TRUE, verbose = FALSE) Execution halted See section 'Generic functions and methods' of the 'Writing R Extensions' manual. * checking...

...be even be forbidden) # Code suggestion no. 2: please use write.csv <- function (...) { Call <- match.call(write.table, expand.dots = TRUE) for (argname in c("col.names", "sep", "dec", "qmethod")) if (!is.null(Call[[argname]])) warning(gettextf("attempt to set '%s' ignored", argname), domain = NA) rn <- eval.parent(Call$row.names) ap <- eval.parent(Call$append) Call$col.names <- if (is.logical(ap) && ap) FALSE else {if (is.logical(rn) && !rn) TRUE else NA} Call$sep &lt...

....First.lib: .First.lib <- function(lib, pkg) { library.dynam("anovaGSL", pkg, lib) } I think these two things are enough. then I just run R CMD check anovaGSL (my package name) followed is the error message: Error: .First.lib failed for 'anovaGSL' Call sequence: 2: stop(gettextf(".First.lib failed for '%s'", libraryPkgName(package)), domain = NA) 1: library(package, lib.loc = lib.loc, character.only = TRUE, verbose = FALSE) Execution halted See section 'Generic functions and methods' of the 'Writing R Extensions' manual. * chec...

I am writing my first R package, and I have been getting the following series of errors when I run R CMD check: * checking S3 generic/method consistency ... WARNING Error: package/namespace load failed for 'REEMtree' Call sequence: 2: stop(gettextf("package/namespace load failed for '%s'", libraryPkgName(package)), call. = FALSE, domain = NA) 1: library(package, lib.loc = lib.loc, character.only = TRUE, verbose = FALSE) Execution halted See section 'Generic functions and methods' of the 'Writing R Extensi...

...function. As far as I can understand, the current code (https://github.com/wch/r-source/blob/66b91578dfc85140968f07dd4e72d8cb8a54f4c6/src/library/base/R/version.R#L50-L56) runs the following steps in case of non-character input: >>> | >>> | 1. It creates a message named msg using gettextf. >>> | 2. Such object is then passed to stop(msg) or warning(msg) according to the following condition >>> | >>> | tolower(Sys.getenv("_R_CHECK_STOP_ON_INVALID_NUMERIC_VERSION_INPUTS_") != "false") >>> | >>> | However, I don't und...

...base registered S3 method for $<- from namespace base namespace:base with value function (x, i, value) { cl <- oldClass(x) class(x) <- NULL nrows <- .row_names_info(x, 2L) if (!is.null(value)) { N <- NROW(value) if (N > nrows) stop(gettextf("replacement has %d rows, data has %d", N, nrows), domain = NA) if (N < nrows && N > 0L) if (nrows%%N == 0L && length(dim(value)) <= 1L) value <- rep(value, length.out = nrows) else stop(gettext...

...as I can understand, the current code (https://github.com/wch/r-source/blob/66b91578dfc85140968f07dd4e72d8cb8a54f4c6/src/library/base/R/version.R#L50-L56) runs the following steps in case of non-character input: >> | >> | 1. It creates a message named msg using gettextf. >> | 2. Such object is then passed to stop(msg) or warning(msg) according to the following condition >> | >> | tolower(Sys.getenv("_R_CHECK_STOP_ON_INVALID_NUMERIC_VERSION_INPUTS_") != "false") >> | &gt...

...ectories ... WARNING Subdirectory 'src' contains no source files. * checking R files for syntax errors ... OK * checking R files for library.dynam ... OK * checking S3 generic/method consistency ... WARNING Error: unable to load R code in package 'ExpressCGH1' Call sequence: 2: stop(gettextf("unable to load R code in package '%s'", libraryPkgName(package )), call. = FALSE, domain = NA) 1: library(package, lib.loc = lib.loc, character.only = TRUE, verbose = FALSE) Execution halted See section 'Generic functions and methods' of the 'Writing R Extensi...

...on of .make_numeric_version() function. As far as I can understand, the current code (https://github.com/wch/r-source/blob/66b91578dfc85140968f07dd4e72d8cb8a54f4c6/src/library/base/R/version.R#L50-L56) runs the following steps in case of non-character input: 1. It creates a message named msg using gettextf. 2. Such object is then passed to stop(msg) or warning(msg) according to the following condition tolower(Sys.getenv("_R_CHECK_STOP_ON_INVALID_NUMERIC_VERSION_INPUTS_") != "false") However, I don't understand the previous code since the output of Sys.getenv("_R_CHECK_S...

...n. As far as I can understand, the current code (https://github.com/wch/r-source/blob/66b91578dfc85140968f07dd4e72d8cb8a54f4c6/src/library/base/R/version.R#L50-L56) runs the following steps in case of non-character input: > | > | 1. It creates a message named msg using gettextf. > | 2. Such object is then passed to stop(msg) or warning(msg) according to the following condition > | > | tolower(Sys.getenv("_R_CHECK_STOP_ON_INVALID_NUMERIC_VERSION_INPUTS_") != "false") > | > | Howe...

...and the RWeka package 0.4-1 and rJava 0.8-4. are successfully installed. I get two error messages while loading both packages. library(RWeka) Error in get(Info[i, 1], envir = env) : internal error -3 in R_decompress1 Error: package/namespace load failed for 'RWeka' 2: stop(gettextf("package/namespace load failed for '%s'", package), call. = FALSE, domain = NA) 1: library(RWeka) library(rJava) Error in get(Info[i, 1], envir = env) : internal error -3 in R_decompress1 Error: package/namespace load failed for 'rJava' 2: stop(gettext...

...development (unstable) (2006-01-15 r37092) * checking for file 'DNAhelperseth/DESCRIPTION' ... OK [snip] * checking R files for library.dynam ... OK * checking S3 generic/method consistency ... WARNING Error: package/namespace load failed for 'DNAhelperseth' Call sequence: 2: stop(gettextf("package/namespace load failed for '%s'", libraryPkgName(package)), call. = FALSE, domain = NA) 1: library(package, lib.loc = lib.loc, character.only = TRUE, verbose = FALSE) Execution halted See section 'Generic functions and methods' of the 'Writing R Extensio...

...and I get an error. For example, in a new session started with R --vanilla from the terminal: > Sys.setlocale(locale='en_US.UTF-8');grid::gpar() [1] "en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_CA.UTF-8" Error in if (R_version_built_under < "3.0.0") stop(gettextf("package %s was built before R 3.0.0: please re-install it", : missing value where TRUE/FALSE needed I've tried debugging this, and the bad lines are these, in loadNamespace: R_version_built_under <- as.numeric_version(built$R) if (R_version_built_under < "3.0.0")...

When reshaping a dataframe in which there are unused factor levels in the id variable, I get the following error: Error in if (!all(really.constant)) warning(gettextf("some constant variables (%s) are really varying", : missing value where TRUE/FALSE needed For example, > df <- data.frame(i = factor(rep(1:5, each = 2)), t = factor(rep(1:2, 5)), x = rep(rbinom(5, 1, 0.5), each = 2), y = rpois(10, 10)) > subdf <- subset(df, i %in...

...value <- switch(value, "1"=, "TRUE"=, "true"=, "True"=, "yes"=, "Yes"= TRUE, "0"=, "FALSE"=,"false"=,"False"=, "no"=, "No" = FALSE, stop(gettextf("invalid environment variable value: %s==%s", "R_FORK_ALLOWED", value))) value <- as.logical(value) } else { value <- TRUE } value <- getOption("fork.allowed", value) if (is.na(value)) { stop(gettextf("invalid op...

...checking index information ... OK * checking package subdirectories ... OK * checking R files for syntax errors ... OK * checking R files for library.dynam ... OK * checking S3 generic/method consistency ... WARNING Error: package/namespace load failed for 'simplepkg' Call sequence: 2: stop(gettextf("package/namespace load failed for '%s'", libraryPkgName(package)), call. = FALSE, domain = NA) 1: library(package, lib.loc = lib.loc, character.only = TRUE, verbose = FALSE) Execution halted See section 'Generic functions and methods' of the 'Writing R Extensi...