Displaying 2 results from an estimated 2 matches for "getpval".
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retpval
2012 Mar 20
0
Running BayesFst in R
...out confidence
intervals or loci IDs) and other times I cannot even generate P-values using
the code supplied.
I am wondering if any one has used R to plot the BayesFst results and can
assist me in working out where I go wrong? Typically, R will become
unresponsive or it will provide errors at the getpvals/getfsts stages
referring to "object m1 not found" - but other times it will work. I am
uncertain exactly what m refers to, but 1440 is the # of loci and 2 is the #
of populations. M may refer to # samples??
The code is as follows:
data.matrix(read.table("fst.out")
getpvals(m1,...
2001 Nov 22
1
p-value using survdiff
Dear all,
Does anyone knows how I could extract the p-value in:
> survdiff(Surv(tempo,status) ~ grupo,data=dados1,rho=1)
Call:
survdiff(formula = Surv(tempo, status) ~ grupo, data = dados1, rho = 1)
N Observed Expected (O-E)^2/E (O-E)^2/V
grupo=1 21 5.12 12.00 3.94 14.5
grupo=2 21 14.55 7.68 6.16 14.5
Chisq= 14.5 on 1 degrees of freedom,