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...to the grep function? I vaguely remember something with %in% operator... Thanks, St?phane. -- "La science a certes quelques magnifiques r?ussites ? son actif mais ? tout prendre, je pr?f?re de loin ?tre heureux plut?t qu'avoir raison." D. Adams -- AGC website <http://www.genoscope.cns.fr/agc> St?phane CRUVEILLER Ph. D. Genoscope - Centre National de S?quencage Atelier de G?nomique Comparative 2, Rue Gaston Cremieux CP 5706 91057 Evry Cedex - France Phone: +33 (0)1 60 87 84 58 Fax: +33 (0)1 60 87 25 14 scruveil at genoscope.cns.fr

...to AF_class (should be 1 and 1 instead of 3 and 3), so it seems that aggregate is not the appropriate function for that I want to do. Is there any other function I could use instead? Best whishes, St?phane. -- ========================================================== Stephane CRUVEILLER Ph. D. Genoscope - Centre National de Sequencage Atelier de Genomique Comparative 2, Rue Gaston Cremieux CP 5706 91057 Evry Cedex - France Phone: +33 (0)1 60 87 84 58 Fax: +33 (0)1 60 87 25 14 EMails: scruveil at genoscope.cns.fr ,scruvell at infobiogen.fr

...be (at least on ggplot website). I tried to do the job on both MS winXP and Linux i586: same result. Did anyone encountered this problem? Did I miss something? My R version is 2.4.1. Thanks, St?phane. -- ========================================================== Stephane CRUVEILLER Ph. D. Genoscope - Centre National de Sequencage Atelier de Genomique Comparative 2, Rue Gaston Cremieux CP 5706 91057 Evry Cedex - France Phone: +33 (0)1 60 87 84 58 Fax: +33 (0)1 60 87 25 14 EMails: scruveil at genoscope.cns.fr ,scruvell at infobiogen.fr ========================================================...

...MySQLDriver", Id = drvId) : unused argument(s) (Id ...) ------------------------------------------------------------------------------------- Could somebody tell me what I have missed? Thx St?phane. -- ========================================================== Stephane CRUVEILLER Ph. D. Genoscope - Centre National de Sequencage Atelier de Genomique Comparative 2, Rue Gaston Cremieux CP 5706 91057 Evry Cedex - France Phone: +33 (0)1 60 87 84 58 Fax: +33 (0)1 60 87 25 14 EMails: scruveil at genoscope.cns.fr ,scruvell at infobiogen.fr

...series 1 and 2 should be side by side for each compartement.... Thanks for any help. St?phane. -- "La science a certes quelques magnifiques r?ussites ? son actif mais ? tout prendre, je pr?f?re de loin ?tre heureux plut?t qu'avoir raison." D. Adams -- AGC website <http://www.genoscope.cns.fr/agc> St?phane CRUVEILLER Ph. D. Genoscope - Centre National de S?quencage Atelier de G?nomique Comparative 2, Rue Gaston Cremieux CP 5706 91057 Evry Cedex - France Phone: +33 (0)1 60 87 84 58 Fax: +33 (0)1 60 87 25 14 scruveil at genoscope.cns.fr

http://bugzilla.mindrot.org/show_bug.cgi?id=1153 svallet at genoscope.cns.fr changed: What |Removed |Added ---------------------------------------------------------------------------- Status|NEW |RESOLVED Resolution| |FIXED ------- Comment #3 from svallet...

https://bugzilla.mindrot.org/show_bug.cgi?id=1285 Simon Vallet <svallet at genoscope.cns.fr> changed: What |Removed |Added ---------------------------------------------------------------------------- CC| |svallet at genoscope.cns.fr --- Comment #5 from Simon Vallet <svallet at genoscope.cns.fr&gt...

...---------------------------------- Thanks for any hint, St?phane. Conf: R-2.4.1 on win XP sp2. -- "La science a certes quelques magnifiques r?ussites ? son actif mais ? tout prendre, je pr?f?re de loin ?tre heureux plut?t qu'avoir raison." D. Adams -- AGC website <http://www.genoscope.cns.fr/agc> St?phane CRUVEILLER Ph. D. Genoscope - Centre National de S?quencage Atelier de G?nomique Comparative 2, Rue Gaston Cremieux CP 5706 91057 Evry Cedex - France Phone: +33 (0)1 60 87 84 58 Fax: +33 (0)1 60 87 25 14 scruveil at genoscope.cns.fr

...ng revision 1.24 diff -u -r1.24 getrrsetbyname.c --- openbsd-compat/getrrsetbyname.c 29 Apr 2007 03:58:07 -0000 1.24 +++ openbsd-compat/getrrsetbyname.c 21 May 2007 13:46:58 -0000 @@ -2,6 +2,7 @@ /* * Copyright (c) 2001 Jakob Schlyter. All rights reserved. + * Copyright (c) 2007 Simon Vallet / Genoscope <svallet at genoscope.cns.fr> * * Redistribution and use in source and binary forms, with or without * modification, are permitted provided that the following conditions @@ -55,7 +56,12 @@ #include <netinet/in.h> #include <arpa/inet.h> +#ifdef HAVE_LDNS +#include <ld...

...hostname Product: Portable OpenSSH Version: 4.3p1 Platform: All OS/Version: All Status: NEW Severity: normal Priority: P2 Component: sshd AssignedTo: bitbucket at mindrot.org ReportedBy: svallet at genoscope.cns.fr When forwarding X11 connections, the DISPLAY variable should be set to match the appropriate interface when X11UseLocalhost is set to "no". Current behaviour is to set DISPLAY from a call to gethostname(), which may not return the wanted value, especially on multi-homed hosts....

...nually patch every new release -- this was reported as a portable-specific bug, but also affects vanilla openssh. The bug is described at http://bugzilla.mindrot.org/show_bug.cgi?id=1153 Simon -- Simon Vallet Ing?nieur Syst?mes/R?seaux G?noscope / CNRG T?l. : 01 60 87 36 06 E-mail : svallet at genoscope.cns.fr

...nd take extra care to configure your so library paths. On systems that are 100% 64bit, (Linux, FreeBSD in my experience) it just works. On Feb 28, 2006, at 9:23 AM, openssh-unix-dev-request at mindrot.org wrote: > Date: Mon, 27 Feb 2006 14:19:25 +0100 > From: Simon Vallet <svallet at genoscope.cns.fr> > Subject: Re: Openssh src - 64 bit clean > To: "Rathi, Dinesh" <drathi at informatica.com> > Cc: openssh-unix-dev at mindrot.org > Message-ID: <20060227141925.12ac231b.svallet at genoscope.cns.fr> > Content-Type: text/plain; charset=ISO-8859-15 >...

...g : [...] debug3: verify_host_key_dns debug1: found 1 insecure fingerprints in DNS debug1: matching host key fingerprint found in DNS [...] Matching host key fingerprint found in DNS. Any idea on the cause of the "out of memory error" ? Simon -- Simon Vallet Ing?nieur Syst?mes/R?seaux Genoscope / CNRG T?l. : 01 60 87 36 06 E-mail : svallet at genoscope.cns.fr

...11 0x000000552aac58d2 in session_close_by_channel () from /usr/sbin/sshd #12 0x000000552aac85a5 in session_close_by_channel () from /usr/sbin/sshd #13 0x000000552aab5b39 in main () from /usr/sbin/sshd Any ideas on how this happens ? Simon -- Simon Vallet Ing?nieur Syst?mes/R?seaux CEA DSV IG / Genoscope T?l. : 01 60 87 36 06 E-mail : svallet at genoscope.cns.fr

Hi All, I run function "kmeans" to cluster a matrix. But when the matrix size is big enough, it keeps saying "did not converge in 10 iterations". Could you explain what it means and if the result is wrong? And the interesting thing is sometimes this warning happens when the sample size is around 51200 x 6, sometimes it happens around 30000 x 6. Does the warning related

...ns Product: Portable OpenSSH Version: -current Platform: Other OS/Version: Linux Status: NEW Severity: enhancement Priority: P2 Component: ssh AssignedTo: bitbucket at mindrot.org ReportedBy: svallet at genoscope.cns.fr Created an attachment (id=1301) --> (http://bugzilla.mindrot.org/attachment.cgi?id=1301) Patch against CVS trying to make use of SSHFP records (RFC 4255) to publish host key fingerprints in the DNS, we're stumbling on some issues. It appears some non-OpenBSD platforms don't...

...RRtype Product: Portable OpenSSH Version: -current Platform: Other OS/Version: Linux Status: NEW Severity: normal Priority: P2 Component: ssh AssignedTo: bitbucket at mindrot.org ReportedBy: svallet at genoscope.cns.fr Created an attachment (id=1296) --> (http://bugzilla.mindrot.org/attachment.cgi?id=1296) Patch against CVS ssh uses an obsolete RRtype to check for signatures on SSHFP records : SIG (RRtype 24) is obsolete for RR signature records since RFC 3755 (see ?3 there). The minimal patch belo...

...d-alone and to explicitly specify the alias IP on the command-line -- however this is not very satisfactory, as it needs human intervention. Is there a bugzilla out there to report this ? Simon -- Simon Vallet Ing?nieur Syst?mes/R?seaux G?noscope / CNRG T?l. : 01 60 87 36 06 E-mail : svallet at genoscope.cns.fr

Hi, I have a naive question... I have produced about 60 graphics and want to put them in one postscipt file , possibly 4 graphics on each page. I can put all of them in the same file (that's ok), but I can't find the way to put 2 or more (precisely 4, in my case) graphics on the same page (each graphics is about 6 inches (width) X 4 inches (height)). Any help would be very much

http://bugzilla.mindrot.org/show_bug.cgi?id=1291 Summary: aes256-ctr, aes192-ctr, arcfour256 broken with OpenSSL 0.9.8e Product: Portable OpenSSH Version: 4.5p1 Platform: All OS/Version: All Status: NEW Severity: minor Priority: P2 Component: sshd AssignedTo: bitbucket at