Displaying 2 results from an estimated 2 matches for "genominator".
Did you mean:
denominator
2010 Feb 24
1
build, data and vignettes
...alled. However, if I do
R CMD build --no-vignettes PKGNAME
R CMD check PKGNAME_VERSION.tar.gz
the package passes R CMD check! Presumably because R CMD check
installs the package first.
This took me a long time to track down (inspired by a recent addition
of dataset to the Bioconductor package Genominator and a subsequent
failed build - specifically the dataset yeastAnno.sources and the
vignette withShortRead.Rnw). I am using lazy loading (in case it
matters, which I don't think it does).
It seems like the relevant fix is to include pdf versions of the
vignette(s) in inst/doc.
On one hand I c...
2011 Mar 04
0
removing files on windows as part of vignette building
This is about the Bioconductor package Genominator.
As part of the vignette building process, we create two sizable
sqlite3 databases, in the vignette directory (inst/doc). When we
build the source tarball, these databases are deleted, but when a
Windows binary is being made on the Bioconductor build servers the
file(s) are not removed (as far as...