Displaying 2 results from an estimated 2 matches for "genetic_analysis".
2006 Feb 16
3
Sweave - problems with underscores in variable names...
..."OPN_443CT" "PPARG1.2_1431GA" "PPARG2_P12A_CG"
[9] "OPG_1181GC"
In tables that are generated have the character after the subscript
subscripted, as opposed to being displayed as desired (see pg 4 of
example output at
http://slack.ser.man.ac.uk/files/genetic_analysis.pdf , please ignore
the table on pg 3, as I said I'm just starting :-).
After googling and searching R-help archives didn't reveal any obvious
problems with this (other than in older versions of R underscores were
not allowed in variable names).
My question is, other than the obvious of r...
2010 Nov 04
4
how to work with long vectors
...eone give some suggestions for long vector?
id reads
Contig79:1 4
Contig79:2 8
Contig79:3 13
Contig79:4 14
Contig79:5 17
Contig79:6 20
Contig79:7 25
Contig79:8 27
Contig79:9 32
Contig79:10 33
Contig79:11 34
matt<-read.table("/house/groupdirs/genetic_analysis/mjblow/ILLUMINA_ONLY_MICROBIAL_GENOME_ASSEMBLY/4083340/STANDARD_LIBRARY/GWZW.994.5.1129.trim_69.fastq.19621832.sub.sorted.bam.clone.depth",
sep="\t", skip=0, header=F,fill=T) #
dim(matt)
[1] 3384766 2
matt_plot<-function(matt, outputfile) {
names(matt)<-c("id",...