search for: genes5

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2013 Jun 19
2
Problems in Constructing Two way Matrix
...d = array(dim = c(1, genes)) m = c() l = 1 w = 1 for(m in 1:rep) { t = time c = cens tab = cbind(t, c) # Resampling Time and Censoring cc = sample(c, replace = TRUE) tt = sample(t, replace = TRUE) xx = Surv(tt, cc) P = predic[,1:5] n = 310 ma = matrix(P, n) boot <- sample(seq(n), replace=TRUE) genes5 = ma[boot, ] for(p in 1: genes){ i = c() for(i in w:l) { z = genes5[,w: l] y = coxph(xx ~ z) } Pval = summary(y) $ coeff[, 5] if( any(Pval <= 0.01) ) sign <- 1 else sign <- 0 pred[1, p] = sign[1] } iter [m, 1:5] = pred[1: 5] } [[alternative HTML version deleted]]
2013 Jun 18
0
Problem in Two way Matrix
...                                                                                # Every Row has 310 values ma = matrix(P, n)                                                           # P cross n, matrix  boot <- sample(seq(n), replace=TRUE)                               # Bootstrap WR in seq(n)  genes5 = ma[boot, ]                                                    # 5 genes Bootstrap Matrix                                        for(p in 1: genes){                                                                               i = c()                                                               ...