Displaying 1 result from an estimated 1 matches for "geneexpr".
Did you mean:
genexpr
2008 Feb 27
2
problem with creation of eSet
...uot;,tumor="primary,secondary,cellline",time =
"0hr,1hr,2hr,4hr", id = "1,2,3,4,5,6,7,8,9")
# Initialize exprSet object
pD <- new("phenoData", pData=pd, varLabels=pdN);
# This is my eSet!!!
metastasis.eset <- new("exprSet", exprs=as.matrix(geneExpr.log),
phenoData=pD)
I get the following error:
The phenoData class is deprecated, use AnnotatedDataFrame (with
ExpressionSet) instead
Can someone suggest me how to use the new method AnnotatedDataFrame to create
eSet?
Thanks
Manisha
[[alternative HTML version dele...