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cenedese
2009 Jul 17
0
How to prpare the input data to writeFASTA ? Examples of CharacterToFASTArecords ...
...a list of FASTA records as one returned by readFASTA"
Since I have description and sequnce in separate variables ... I do not know how to use it.
zz <- file (filname,"w")
write(miRNA.rec, zz, append = FALSE)
write(miRNA.seq,zz, append = TRUE)
#
geneDesc <- paste (">",gene.id, "|", gene.map[i,"ensembl_transcript_id"], sep="")
geneSeq <- gene.seq[i,"3utr"]
gene.string <- list(desc=geneDesc, seq=geneSeq)
writeFASTA (gene.string, zz)
Thank you in advance for...