Displaying 2 results from an estimated 2 matches for "gen_dist".
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gen_dists
2012 Mar 14
2
Using the mantel test in Ape Package
Hi,
I am trying to use a mantel test on two distance matrices. The code I have entered for each is:
Gen_dists <- read.csv(file.choose(),
stringsAsFactors = FALSE,
na.strings = c(" "),
fill = T,
header =...
2010 Sep 21
1
partial dbRDA or CCA with two distance objects in Vegan.
...8): 2481-2490.)
LEGENDRE, P. and M.-J. FORTIN (2010). "Comparison of the Mantel test and
alternative approaches for detecting complex multivariate relationships
in the spatial analysis of genetic data." Molecular ecology resources
early copy online
Snippet from analysis script:
> Gen_Dist<-dist.genpop(mygenpop,method=2,diag=F,upper=F)
> str(Gen_Dist)
Class 'dist' atomic [1:666] 0.866 0.757 0.813 0.872 0.887 ...
..- attr(*, "Labels")= Named chr [1:37] "4879" "4883" "4884" "4885" ...
.. ..- attr(*, "names&quo...