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steffen
2010 Sep 21
1
partial dbRDA or CCA with two distance objects in Vegan.
...a/capscale functions in vegan to analyse
genetic distance data ( provided as a dist object calculated using
dist.genpop in package adegenet) with geographic distance partialled out
( provided as a distance object using dist function in veganthis method
is attempting to follow the method used by Geffen et al 2004 as
suggested by Legendre and . FORTIN (2010).
I cannot see how to introduce the Conditioning ( partialled) second dist
matrix. as you can see from the code snippet below, the two dist
objects are of the same dimensions. - I get an error using capscale:
Error in qr.fitted(Q...