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2018 Mar 21
0
Error in GDCprepare step of TCGAbiolinks
...o.
Every time i run this GDCprepare command this same error comes as biomart
service is not available. So i had contaced the Biomart people but they
said that the Biomart is working fine.
below is the complete R code i am usign with the corresponding error,
library(TCGAbiolinks)
query.exp <- GDCquery(project = "TCGA-LUAD",
data.category = "Transcriptome Profiling",
data.type = "Gene Expression Quantification",
workflow.type = "HTSeq - Counts",
experimental.strategy = &...