Displaying 1 result from an estimated 1 matches for "gasurv".
2010 May 20
1
ERROR: cannot allocate vector of size?
...-l arch=x86_64] I am
randomly assigned to a x86_64 node.
I am using package GenABEL. My data (~ 650,000 SNPs, 3,000 people) loads in
okay and I am able to look at the data using basic commands [nids, nsnps,
names(phdata)]
The problem occurs when I try to run the extended analysis: xs <-
mlreg(GASurv(age,dm2)~sex,dta)
******************
1) I have looked through the memory limits on R
mem.limits()
nsize vsize
NA NA
2) Code:
gc()
used (Mb) gc trigger (Mb) max used (Mb)
Ncells 961605 51.4 1710298 91.4 1021138 54.6
Vcells 64524082 492.3 248794678 1898.2 68885474 5...