search for: garvan

...file (ie double clicking in the file manager) works fine as does changing the destination to another "real" NT Share. The problems only occurs on SAMBA volumes and not when using another share from another NT. The batch file contains only one simple line xcopy "d:\current datafile\garvan.4dd" "t:\" where t drive is the mapped samba volume. Originally I thought it was something to do with "who owns/runs the AT Scheduler" but setting it's author to be me (via startup button in the services control panel - I am an administrator on this machine) still fa...

...the sessionInfo shows the package name was properly processed. Is this a spurious warning ? I'm using: R version 2.13.0 (2011-04-13) Platform: x86_64-unknown-linux-gnu (64-bit) (actually Ubuntu 10.10) -------------------------------------- Dario Strbenac Research Assistant Cancer Epigenetics Garvan Institute of Medical Research Darlinghurst NSW 2010 Australia

..."Blue") { cat(rs*100, colour) }) setMethod("myFun", "character", function(cs, colour = "Red") { cat(cs, colour) }) Thanks for any tips, Dario. -------------------------------------- Dario Strbenac Research Assistant Cancer Epigenetics Garvan Institute of Medical Research Darlinghurst NSW 2010 Australia

...ests: of the DESCRIPTION file (it's require()d elsewhere). I'm trying to avoid putting packages in Depends: , so my package loads fast. Any tips of what I'm not understanding properly ? Thanks. -------------------------------------- Dario Strbenac Research Assistant Cancer Epigenetics Garvan Institute of Medical Research Darlinghurst NSW 2010 Australia

...the same error. Is this a bug in agnes() ? It doesn't seem to fulfil the claim made by its documentation. The matrix I'm using can be obtained here : http://129.94.136.7/file_dump/dario/iMatrix.obj -------------------------------------- Dario Strbenac Research Assistant Cancer Epigenetics Garvan Institute of Medical Research Darlinghurst NSW 2010 Australia

...ence from 1-p was substantially higher than the actual incidence. My question is: is it appropriate to use 1-p estimated from Kaplan-Meier as the incidence of disease? If not, why not? Regards, Nguyen ____________________________ Nguyen Dinh Nguyen, Bone and Mineral Research Program Garvan Institute of Medical Research St Vincent's Hospital 384 Victoria Street, Darlinghurst Sydney, NSW 2010 Australia Tel; 61-2-9295 8274 Fax: 61-2-9295 8241 E-mail: n.nguyen@garvan.org.au [[alternative HTML version deleted]]

Dear all, A friend of mine, who just installed Rcmdr package. When calling the package, the error as following comes up. And actually, I've checked in CRAN packages, the tcltk package doesn't exist anymore, but tcltk2. Any help is appreciated Regards Nguyen D Nguyen Garvan Institute of Medical Research Sydney, Australia library(Rcmdr) Loading required package: tcltk Loading Tcl/Tk interface ...Error in structure(.External("dotTclObjv", objv, PACKAGE = "tcltk"), class = "tclObj") : [tcl] invalid command name "se". Error : .o...

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...atchable on. But R 2.13 wants me to document this class that I don't own: * checking for missing documentation entries ... WARNING Undocumented S4 classes: AffymetrixCelSet Is this truly necessary ? -------------------------------------- Dario Strbenac Research Assistant Cancer Epigenetics Garvan Institute of Medical Research Darlinghurst NSW 2010 Australia

...jjj} \item{organism}{ghi} \item{seqLen}{def} \item{do.warn}{abc} \item{...}{xyz} } \details{ Details. } \value{ Text here. } \author{A Person} \examples{ #See the manual } Thanks, Dario. -------------------------------------- Dario Strbenac Research Assistant Cancer Epigenetics Garvan Institute of Medical Research Darlinghurst NSW 2010 Australia

...jjj} \item{organism}{ghi} \item{seqLen}{def} \item{do.warn}{abc} \item{...}{xyz} } \details{ Details. } \value{ Text here. } \author{A Person} \examples{ #See the manual } Thanks, Dario. -------------------------------------- Dario Strbenac Research Assistant Cancer Epigenetics Garvan Institute of Medical Research Darlinghurst NSW 2010 Australia

Dear all, I found something strange when calculating sin of pi value sin(pi) [1] 1.224606e-16 pi [1] 3.141593 sin(3.141593) [1] -3.464102e-07 Any help and comment should be appreciated. Regards Nguyen ____________________________ Nguyen Dinh Nguyen Garvan Institute of Medical Research Sydney, Australia

...o flatten all the dot plots and graphics, so that they don't take a long time to load on a slow computer in Adobe Reader, without using external programs outside of R ? Thanks, Dario. ------------------------------------------------- Dario Strbenac Research Assistant Cancer Epigenetics Garvan Institute of Medical Research Darlinghurst NSW 2010 Australia

...The matrix of observations can be found at : http://129.94.136.7/file_dump/dario/all.obj I'm using R version 2.13.0 (2011-04-13) on Platform: x86_64-unknown-linux-gnu (64-bit) and have cluster_1.13.3. -------------------------------------- Dario Strbenac Research Assistant Cancer Epigenetics Garvan Institute of Medical Research Darlinghurst NSW 2010 Australia

Dear Christian, Every single time check update package, ?cwhmisc? always requests updating. I?m aware that the package was latest updated in CRAN on 20Nov2008. Is there anything wrong with my R library or somethingelse? I use R 2.8.1 on Window XP service pack 2 Regards Nguyen Garvan Institute of Medical Research Sydney, Australia

...he Design package that when I just started running cuminc function, R was suddenly closed. These incidents suggest that maybe many other survival dependent packages being involved the problem Could you please consider the matter My R version: 2.8.1 Window XP Service pack 3 Regards Nguyen D Nguyen Garvan Institute, Australia [[alternative HTML version deleted]]

...-7" I got the same error if I used the older version of lme4 "0.95-1" which was mentioned in a mail to this list serve on 11th April 2005 I am using Microsoft Windows XP Professional Version 2002. I would really appreciate any advice!! Thanks so much Dr Margaret Gardiner-Garden Garvan Institute of Medical Research Sydney Australia

...: [1] en_AU.UTF-8/en_AU.UTF-8/C/C/en_AU.UTF-8/en_AU.UTF-8 attached base packages: [1] stats graphics grDevices utils datasets methods base > ----------------------------------------------------- Mark Cowley, PhD Pancreatic Cancer Program | Peter Wills Bioinformatics Centre Garvan Institute of Medical Research, Sydney, Australia ----------------------------------------------------- [[alternative HTML version deleted]]

...manual also says "In particular, large packages providing ?only? data for examples or vignettes should be listed in ?Suggests? rather than ?Depends? in order to make lean installations possible." -------------------------------------- Dario Strbenac Research Assistant Cancer Epigenetics Garvan Institute of Medical Research Darlinghurst NSW 2010 Australia

...Pr(>|z|) #(Intercept) -2.05734 0.24881 -8.2686 < 2.2e-16 *** #PathologyHyperplasia -1.76627 0.44909 -3.9330 8.389e-05 *** NB. Intensity.over2.hyp.canc is the staining of the core (ie 0 or 1) Pathology is Hyperplasia or Cancer Dr Margaret Gardiner-Garden Garvan Institute of Medical Research 384 Victoria Street Darlinghurst Sydney NSW 2010 Australia Phone: 61 2 9295 8348 Fax: 61 2 9295 8321 [[alternative HTML version deleted]]