Displaying 8 results from an estimated 8 matches for "fungi".
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fung
2006 Jul 22
3
Multcomp
...7730014
Oak 30.12608508
Oak 25.76088669
Oak 30.14750974
Hornbeam 17.05307949
Hornbeam 15.32805111
Hornbeam 18.26920177
Hornbeam 21.30987049
Hornbeam 21.7173223
I am using the multcomp package to do multiple comparisons as follows
library(multcomp) # loads the package
fungus<-read.table("fungi.txt", Header=T) # Reads the data from file saved as fungi.txt
fungus.cirec<-simint(Fungus.yield~Habitat, data=fungus,conf.level=0.95,type =c("Tukey")) # Computes cimultaneous intervals using Tukey's method
plot(fungus.cirec) # plots the data
The plot function plots...
2007 May 10
1
CombineZ5
Hello
I am trying to run Combine Z5 under wine (my version is 0.9.4)
and have several probems
has anyone succeeded in running this very useful program for
macrophotography ?
http://www.hadleyweb.pwp.blueyonder.co.uk/CZ5/combinez5.htm
Thanks
Fungi
2003 Jul 09
2
Packages, generics, S3 and S4
...what
is described in the 'Green Book' p43. However the 'Green Book' is largely
unencumbered by S3 methods AFAIK. Venables & Ripley (2000) addresses the
issue of defining an S4 generic on the same name as an S3 generic on p108.
setMethod("plot",signature(x="fungi",y="missing"),plot.fungi)
This clearly works, but I am not clear whether the definition of an S4
generic
'on top of' i.e. with the same name 'plot' as an S3 generic (as in the
example
above) is generally regarded as bad practice, or is quite OK. If it is
done,
is...
2007 Nov 14
1
reading tables from url
...5)[,1:3]
X...Columns. ProjectID Organism.Name
1 20303 Acanthamoeba castellanii Neff Protists
2 13657 Acyrthosiphon pisum LSR1 Animals
3 12434 Aedes aegypti Liverpool Animals
4 12635 Ajellomyces capsulatus G186AR Fungi
5 12653 Ajellomyces capsulatus G217B Fungi
Warning messages:
1: connected to 'www.ncbi.nlm.nih.gov' on port 80. in: open.connection
(file, "r")
2: -> GET /genomes/leuks.cgi?dump=selected HTTP/1.0
Host: www.ncbi.nlm.nih.gov
Pragma: no-cache
in: open.connecti...
2005 Jun 01
1
glm
Hi, list,
I have got a dataset on soil and plant. I would like to fit a "glm" to my
data. My response variable is percentage data. That is percent of plant root
length colonized by Arbuscular micorrhiza fungi. Because of the nature of my
data, I am not quite sure whether gamma or gaussian distribution is suitable
for this type of data. If I use gamma distribution, which link function is
appropriate?
I appreciate your suggestions very much.
Thanks in advance!
Mahdi
--
-----------------------------...
2006 Nov 22
1
Probit analysis
...arium oxysporum* by the food poisoning method. Solutions of the
compound at concentrations of 0, 50, 100, 150, 200 and 250µg/ ml were added
to sterilized medium in Petri dish (9cm dia.) and after transferring the
mycelia of fungal strains, the dishes were incubated in the dark. When the
mycelium of fungi reached the edges of the control (0µg/ ml) dishes, the
antifungal indices were calculated. Each test was repeated three times and
the average was calculated. The formula to calculate antifungal index (AI)
was
AI % = (1- Da / Db) * 100
Where Da = diameter of growth zone in experiment (cm); Db =...
2012 Sep 11
1
using alternative models in glmulti
All,
I am working on a multiple-regression meta-analysis and have too many
alternative models to fit by hand. I am using the "metafor" package in
R, which generates AIC scores among other metrics. I'm using a simple
formula to define these models. For example,
rma(Effect_size,variance, mods=~Myco_type + N.type +total,
method="ML")->mod where Effect_size is the