search for: fpc_func

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2012 Jun 28
3
Storing results in a single file after looping over all files
...t;- strsplit(i, "\\.")[[1]] of <- paste(head(of, 1)) data <- read.table(file=i, header=T) y<-data$PHI num<-length(y) index1<-c(1:num_sample)[y==1] index2<-c(1:num_sample)[y==0] gen<-as.matrix(data[,-c(1:2)]) source("pcc.R") # a function for my use out<- fpc_func(gen,num,index1,index2) out1<-as.data.frame(out) id1<-data[,2] id<- as.data.frame(iid1) out2<-cbind(iid1,out1) colnames(out2)[2] <- of } write.table(out2, file="ALL.txt", append=T, col.names=T, row.names=F, quote=F, sep = "\t") ####################### I can do...