search for: foodwebs

I don't know the right computer science words for this question, I'm afraid. Apology in advance. How do you find your way around in somebody else's code? If the user runs a specific command, and wants to know how the data is managed until the result is returned, what to do ? I've tried this manually with tools like mtrace and browser. This is a bit frustrating because the

Hi, Is there a function taking a function as an argument, which returns all the functions it calls, and all the the functions those functions call, and so on? I could use Rprof, but that would involve executing the function, which may miss some branches of code. I'd really like a function which looks at the source code to work out all the functions that could possibly be called. When I

I'm pleased to announce that the FuncMap (v 1.0) package is available on CRAN. This is a single function package that makes hive plots of function calls for a specified package. Hive plots are a powerful concept developed by Martin Krzywinski at the Genome Sciences Center (mkweb.bcgsc.ca/linnet/). FuncMap is a simple implementation of Martin's concept. Function calls in a

I'm pleased to announce that the FuncMap (v 1.0) package is available on CRAN. This is a single function package that makes hive plots of function calls for a specified package. Hive plots are a powerful concept developed by Martin Krzywinski at the Genome Sciences Center (mkweb.bcgsc.ca/linnet/). FuncMap is a simple implementation of Martin's concept. Function calls in a

mvbutils::foodweb produces a graphical display of the hierarchy (or network or ...) of function calls. Isolated functions are not called. This might help you. -- Mike On Wed, Nov 15, 2017 at 12:44 AM, Alexander Engelhardt <alex at chaotic-neutral.de> wrote: > I've inherited a large R codebase which has grown over a few years and a few > different developers. > > It

Hi, I'd like to know which functions in a package call one specific function. I think I've seen a tool for identifying such dependencies, but now I can't find it :-( Searches of help and R site search for keywords like function, call, tree, depend haven't helped :-( Can anyone point me in the right direction? Thanks in advance, Keith Jewell

I've inherited a large R codebase which has grown over a few years and a few different developers. It contains many things I'd like to delete: - Unused functions - Variable definitions that are never called - Unreachable code I'd write that myself, it would even be fun, but I don't want to reinvent the wheel. Is there an R package that can find these things? I've heard of

....% cell^{-1} %.% sec^{-1}," ]"))results in two lines left not centered and with a large gap.any suggestions.ThanksMarcel  ______________________________________________________________________________ Marcel Sandow Leibniz Institute of Marine Sciences - IFM-Geomar Experimental Ecology: Foodwebs Düsternbrooker Weg 20 24105 Kiel Germany Fon: +49-431-600-4404 Fax: +49-431-600-1515 Homepage: http://www.ifm-geomar.de E-mail: msandow@ifm-geomar.de [[alternative HTML version deleted]]

Hello dear R help group, I wish to create a flowchart of my R code (specifically for profiling the connection of different functions). Maybe something similar to this: http://www.fatesoft.com/s2f/ But for R, and that it will be free (open source would be best). After some searching, I found this package: http://cran.r-project.org/web/packages/diagram/ But couldn't find a way to this

Hi, I am having trouble extracting just the year or the month or the day from a date such as 5/7/2007 which is May 7th 2007. Is there any particular function to extract just the year from this format? When I am reading this data from a text file it is reading it correctly in the same format but does not acknowlede it as date but as a factor. If I try as.date(5/7/2007) then it is converting it to

Greetings - Is anyone aware of an automatic code diagrammer/flow chart creator that works for the R language (either a contributed package, or external software)? I need to explain some code structure of a package I'm working on to non-R users, and would find it extremely helpful to have such a program similar to, for example, Visustin ( http://www.aivosto.com/visustin.html ). I can do it

CRAN (and crantastic) updates this week New packages ------------ * disclapmix (0.1) Maintainer: Mikkel Meyer Andersen Author(s): Mikkel Meyer Andersen and Poul Svante Eriksen License: GPL-2 http://crantastic.org/packages/disclapmix disclapmix makes inference in a mixture of Discrete Laplace distributions using the EM algorithm. * EstSimPDMP (1.1) Maintainer: Unknown Author(s):