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fformat
2013 Jun 07
0
error running mvabund package
...t;-mvabund(florabund, check.rows=FALSE, check.names=TRUE)
vegtype=as.factor(vegtype$vegtype)
plot(cplflorabund~vegtype) #there is a column called "treatment", and
another called "block"
plot.mvabund(cplflorabund)
##Fitting predictive models
transect=as.factor(transect$transect)
flormat=as.matrix(florabund)
abund.nb <-manyglm(flormat~transect*vegtype, family="nagative.binomial")
predict(abund.nb, type= "response")
##Checking Model Assumptions
plot(abund.nb)
meanvar.plot(flormat~transect, col=as.numeric (vegtype)) #direct plot of
mean-variace relationsh...