search for: floatvector

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2009 Nov 19
3
Issue when calling deparse(substitute(x)) from C with "anonymous" R vectors ?
...forum_name=rpy-list ), but it will likely be present in other bridges to R as well. #using R-2.10 and rpy2-2.1.dev >>> import rpy2.robjects as robjects >>> f = robjects.r('''function(x) return(deparse(substitute(x)))''') >>> tuple(f(robjects.FloatVector(range(17)))) ('c(0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16)',) # length 1 >>> tuple(f(robjects.FloatVector(range(18)))) ('c(0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17', ')') # length 2 !! Does it seem to others like an issue prese...
2010 May 19
1
Why does my RPy2 program run faster on Windows?
...ate" %(cds,bm,cds,bm)): d1.append(str(row[0])) v1.append(row[1]) v2.append(row[2]) t4=datetime.now() t1=datetime.now() print "Calculating" d1.pop(0) d1vec = robjects.StrVector(d1) v1vec = robjects.FloatVector(v1) v2vec = robjects.FloatVector(v2) r1 = r('Return.calculate(%s)' %v1vec.r_repr()) r2 = r('Return.calculate(%s)' %v2vec.r_repr()) tl = robjects.rlc.TaggedList([r1,r2],tags=('Geo','Nifty')) df = robjects.DataFrame(tl)...
2013 Mar 07
0
initial starting values with constOptim()
...s. For example I have 11 parameters to estimate (let's call the parameters as pam1..pam11) and their true value is: pam1=0.2 pam2=0.3 pam3=0.4 pam4=0.7 pam5=0.55 pam6=0.45 pam7=0.1 pam8=0.01 pam9=0.01 pam10=45 pam11=45 In the contrtOptim() I am setting the starting parameters as: start_param=FloatVector((pam1,pam2,pam3,pam4,pam5,pam6,pam7,pam8,pam9,pam10,pam,11)) where I set the starting values. I have observed that when I am using different sets of starting values the results change. For example when I am using the set start_param=FloatVector((0.2,0.3,0.4,0.6,0.7,0.8,0.3,0.011,0.011,15,15)) an...
2011 Oct 17
0
rpy2 pie chart
...20% E 10% filename = './testing.png' grdevices = importr('grDevices') rdevices.png(file=filename, width=1200, height=800) dataf = Robjects.DataFrame({'pathways':Robjects.StrVector(Pathways), occurrences' : Robjects.FloatVector(Occurrences) }) pie = ggplot2.ggplot(dataf)+ \ ggplot2.aes_string(x='',fill='pathways',weight="amounts")+\ ggplot2.geom_bar(width=1)+\ ggplot2.coord_polar(theta="y") pie.plot() grdevices.dev_off() but this...