Displaying 2 results from an estimated 2 matches for "fitplm".
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fitglm
2007 Jul 30
2
problems saving and loading (PLMset) objects
...why my saved PLMset objects
come out all wrong. To use an example:
Setting up an example PLMset (I have the same problem no matter what example
I use)
> library(affyPLM)
> data(Dilution) # affybatch object
> Dilution = updateObject(Dilution)
> options(width=36)
> expr <- fitPLM(Dilution)
This works, and I'm able to get the probeset coefficients with coefs(expr).
until I save and try reloading:
> save(expr, file="expr.RData")
> rm(expr) # just to be sure
> expr <- load(expr.RData)
Now, running coefs(expr) says:
> Error in func...
2007 Feb 07
2
problems installing R on Linux
Hi everyone,
I am having installation problems, but this is how it all started:
I had some errors running the bioconductor package affyPLM that uses
LAPACK/Blas
> Pset <- fitPLM(Data)
Background correcting PM
Normalizing PM
Fitting models
/usr/local/lib/R/bin/exec/R: relocation error:
/usr/local/lib/R/lib/libRlapack.so: undefined symbol: s_copy
# thrown out of R ....
I was using R version 2.4.0, so I decided to upgrade to 2.4.1 (on
i686-pc-linux-gnu) and to try vario...