Displaying 1 result from an estimated 1 matches for "firefactors".
2011 Aug 10
1
Plotting Ellipses and Points of Matching Colors in an Ordination
...points for those same groups.
>From and earlier post, I saw the code to make a plot of the ordination using
different colors for my different groups. My functional code is below:
library(vegan)
comvars <- read.csv("commvars9trim2.csv")
com.mds <- metaMDS(comvars, trace=FALSE)
firefactors <- read.csv("commvars9factors.csv")
plot(com.mds, type = "n")
points(com.mds, dis="si", pch = as.numeric(firefactors$comm4), col =
as.numeric(firefactors$comm4))
This code will generate the ordination and plot it, using the factor levels
from firefactors$comm4 to d...