search for: findformat

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2013 Mar 25
1
using openbabel plugins in R
...with embedding C/C++ code in R, but I'm having some trouble with the plugin mechanism of OpenBabel in this case. The problem is that the formats are not available when I run the OpenBabel code from within R. So, for example, if I search for the SDF format like so: OBFormat *format = conv.FindFormat("SDF"); I always get back a 0 value. The same chunk of code executed outside of R, as a normal stand-alone program, works fine. So does anyone know how I can ensure that the formats get loaded? Thanks. One other thing to mention, someone might suggest linking against a static versio...