Displaying 2 results from an estimated 2 matches for "final_true_otus_97_1".
2017 Sep 16
2
Help with RDA analysis, function ''varpart'' in vegan
...:/Sher_sophi_new3/RDA/WQ_RDA_1.csv", row.names = 1)
LU2_loc_RDA <- read.csv("F:/Sher_sophi_new3/RDA/LU2_loc_RDA_1.csv",
row.names = 1)
LU2_bas_RDA <- read.csv("F:/Sher_sophi_new3/RDA/LU2_basin_RDA_1.csv",
row.names = 1)
comm <- read.csv("F:/Sher_sophi_new3/RDA/Final_true_OTUs_97_1.csv",
row.names = 1)
x1 = as.matrix(WQ_RDA)
x2 = as.matrix(LU2_loc_RDA)
x3 = as.matrix(LU2_bas_RDA)
comm = as.matrix(t(comm))
RDA_Ger = varpart(comm, x1, x2, x3, transfo="hellinger", scale = FALSE,
na.action = na.omit
I get this error message:
Error in as.vecto...
2017 Sep 17
0
Help with RDA analysis, function ''varpart'' in vegan
...RDA_1.csv", row.names = 1)
> LU2_loc_RDA <- read.csv("F:/Sher_sophi_new3/RDA/LU2_loc_RDA_1.csv",
> row.names = 1)
> LU2_bas_RDA <- read.csv("F:/Sher_sophi_new3/RDA/LU2_basin_RDA_1.csv",
> row.names = 1)
> comm <- read.csv("F:/Sher_sophi_new3/RDA/Final_true_OTUs_97_1.csv",
> row.names = 1)
>
> x1 = as.matrix(WQ_RDA)
> x2 = as.matrix(LU2_loc_RDA)
> x3 = as.matrix(LU2_bas_RDA)
> comm = as.matrix(t(comm))
>
> RDA_Ger = varpart(comm, x1, x2, x3, transfo="hellinger", scale = FALSE,
> na.action = na.omit
>...