search for: fam

I am struggling with migrating some stata code to R. I have a data frame containing, sometimes, repeat observations (rows) of the same family. I want to keep only one observation per family, selecting that observation according to some other variable. An example data frame is: # construct example data fam <- c(1,2,3,3,4,4,4) wt <- c(1,1,0.6,0.4,0.4,0.4,0.2) keep <- c(1,1,1,0,1,0,0) dat <- as.data.frame(cbind(fam,wt,keep...

Dear Samba Friends, I got the following error again and again: <snip> ..... Sep 4 10:58:18 sun smbd[94479]: [2006/09/04 10:58:18, 0] smbd/notify_fam.c:fam_check_reconnect(136) Sep 4 10:58:18 sun smbd[94479]: failed to connect to FAM service Sep 4 10:58:23 sun smbd[94479]: [2006/09/04 10:58:23, 0] smbd/notify_fam.c:fam_check_reconnect(136) Sep 4 10:58:23 sun smbd[94479]: failed to connect to FAM service Sep 4 10:58:24 sun smbd[94479]: [2...

Hi all, I am compiling Samba 3.5.8 on Irix 6.5.28 using gcc 3.4.6 . Towards the end the linking phase stops with the following error: [...] Compiling ../lib/popt/poptparse.c Linking bin/smbd /usr/lib32/libfam.a(fam.o): In function `FAMOpen2': /xlv44/6.5.28m/work/eoe/lib/libfam/libfam_n32_M3/fam.c++:51: relocation truncated to fit: R_MIPS_GPREL16 against `.srdata' /usr/lib32/libfam.a(fam.o): In function `checkRequest(FAMRequest *, char const *)': /xlv44/6.5.28m/work/eoe/lib/libfam/libfam_...

...t, but I found that for control flow can't work in the xyplot. The program code and some of my data file are shown as follow. Would someone please tell me where my code is wrong and how can make the code right? Thanks. Best regards Yuanzhen Lin Code: library("lattice") plot.data$Fam<-as.numeric(plot.data$Fam) #### xyplot can work if one by one in Fam #### plot3.data<-subset(plot.data,Fam==1) heading=paste("Fam_",1) xyplot(rank ~ ca, data=plot3.data, groups=Spacing, type="o",main=heading) ###### the following code for control flow doesn...

...r model with the lmer-function in the Matrix package, version 0.98-7. I have a respons variable (sfox) that is 1 or 0, whether a roe deer fawn is killed or not by red fox. This is expected to be related to e.g. the density of red fox (roefoxratio) or other variables. In addition, we account for family effects by adding the mother (fam) of the fawns as random factor. I want to use AIC to select the best model (if no other model selection criterias are suggested). the syntax looks like this: > mod <- lmer(sfox ~ roefoxratio + (1|fam), data=manu2, family=binomial) The output looks ok...

Hello, I know that it'll be quite easy to do what I want but somehow I am lost as I am new to R. I want to get summary results arranged by groups. In detail I'd like get the number (levels) of Species per Family like for this dataset: SPEC <- factor(c("a","a","b","b","c","c","c","d","e","e","e","e")) FAM <- factor(c("A","A","A","A","B...

Hi, I am trying to match the order of the rownames of a dataframe with the rownames of another dataframe (I can't simply sort both sets because I would have to change the order of many other connected datasets if I did that): Also, the second dataset (snp.matrix$fam) is a snp matrix slot: so for example: data_one: x y z sample_1110001 -0.3352623 -1.141462 -0.4032494 sample_1110005 0.1862424 0.015944 0.1329059 sample_1110420 0.1309120 0.004005596 0.061172...

Hi, I want to randomly pick 2 fish born the same day but I need those individuals to be from different families. My table includes 1787 fish distributed in 948 families. An example of a subset of fish born in one specific day would look like: >fish fam born spawn 25 46 43 25 46 56 26 46 50 43 46 43 131 46 43 133 46 64 136 46 43 136 46 42 136 46 50 136 46 85 137 46 64 142 46 85 144 46 56 144 46 6...

Hi, I'm having some odd problems with samba in combination with fam. On my linux system I have mounted some partitions that are shared by a Win2k machine on my LAN. With any GUI filemanager using fam I can create files and directories, but I can't delete directories, only files. If I try to delete a directory, it just doesn't work. If I try to delete a...

Hi, I'm having some odd problems with samba in combination with fam. On my linux system I have mounted some partitions that are shared by a Win2k machine on my LAN. With any GUI filemanager using fam I can create files and directories, but I can't delete directories, only files. If I try to delete a directory, it just doesn't work. If I try to delete a...

...ed-effects model fit by REML Data: dat Log-restricted-likelihood: 22.3213 Fixed: express1 ~ race * thaps + race * tuni (Intercept) race thaps tuni race:thaps race:tuni 7.00034057 -0.02675202 -0.05687972 0.01265845 -0.03859781 -0.11248439 Random effects: Formula: ~1 | fam (Intercept) StdDev: 0.1131353 Formula: ~1 | twin %in% fam (Intercept) StdDev: 0.1740635 Formula: ~1 | thaw %in% twin %in% fam (Intercept) Residual StdDev: 0.1177579 0.1182267 Variance function: Structure: Different standard deviations per stratum Formula: ~1 | rac...

Dear R users I have built the following model m1<-lmer(y~harn+foodn+(1|ass%in%pop%in%fam),family = "quasibinomial") where y<-cbind(alive,dead) where harn and foodn are categorical factors and the random effect is a nested term to represent experimental structure e.g. Day/Block/Replicate ass= 5 level factor, pop= 2 populations per treatment factor in each assay, 7 reps...

Hi, Is there any planned support for FAM http://oss.sgi.com/projects/fam/ in dovecot? One of my favourite features of Courier IMAP server is that it alerts my email client through IMAP when email has arrived. Regards, Mick

Hi, Asterisk database is made of <family><key> records such as: fam key1 val1 fam key2 val2 ... fam key100 val100 I'm looking for the smartest way to iterate among different keys associated to a given family. One way to do this is to parse "database show fam" response. Is there something smarter ? Somethi...

This is a simple problem, but a mystery to me. I'm trying to grab $Family "Scelionidae" from one dataframe and put it into another dataframe occupied with NA in $Family. The result is a "158" ends up there instead of Scelionidae. Simply put fam$Family[1] <- least$Family[1] If I have made a mistake here, can somebody point it out. I'v...

On Tue, 06/28 04:45, Christoph Hellwig wrote: > On Tue, Jun 28, 2016 at 10:39:15AM +0800, Fam Zheng wrote: > > Userspace listens to the KOBJ_ADD uevent generated in add_disk. At that > > point we haven't created the serial attribute file, therefore depending > > on how fast udev reacts, the /dev/disk/by-id/ entry doesn't always get > > created. > > &gt...

On Tue, 06/28 04:45, Christoph Hellwig wrote: > On Tue, Jun 28, 2016 at 10:39:15AM +0800, Fam Zheng wrote: > > Userspace listens to the KOBJ_ADD uevent generated in add_disk. At that > > point we haven't created the serial attribute file, therefore depending > > on how fast udev reacts, the /dev/disk/by-id/ entry doesn't always get > > created. > > &gt...

...ct. Sex (males/females) is the first fixed effect and sexual genotype (XY, YY, WX and WY) the second one. Sexual Genotype is nested in sex. XY and YY individuals are males and WX and WY females. I crossed 8 XY males with 8 WY females and 8 YY males with 8 WX females. Each cross corresponds to a family (i.e. family 1 to 8 for XY x WY and family 9 to 16 for YY WX). For each family I have 20 offspring. Family is nested in sexual genotype as a random factor. My data looks like: reps<-factor(sample(c(0,1),640,replace=T,prob=c(0.95,0.05))) sex<-factor(rep(c("M","F"),e...

Hi all, I''ve got a simple contingency table produced with table(), and the upper and lower quartiles (quantile25 and quantile75) for the same dataset. Is there a function that tells me in which category does the value of the quartile falls into? for example: tabsp <- table(fam$I[fam$I>0]) 1 3 6 6 1 1 and for the cumulative frequency distribution tabcum <- cumsum(tabsp) 1 3 6 6 7 8 so, If my lower quartile is "2", I can visually determine that it falls into class/category "1" with 6 observations. Is there a function that performs this deter...

Hi, look this: > summary(fam??lia) Anacardiaceae Annonaceae Bombacaceae Cecropiaceae 2 4 1 3 Chrysobalanaceae Clusiaceae Euphorbiacaea Fabacea 1 1 4 3 Fabaceae...