search for: extracat

Dear R community, I would like to plot a partial hclust output, so I?am looking for a subtree function that would return an tree structure I can plot. I ran the test code of subtree following the instruction on?http://finzi.psych.upenn.edu/library/extracat/html/subtree.html However, an error message popped up: ====> library(extracat) Attaching package: ?extracat? The following object is masked _by_ ?.GlobalEnv?: ? ? subtreehc <- hclust(dist(USArrests), "ave")>?> hcs <- subtree(hc, k = 7)Error in subtree(hc, k = 7) : unused ar...

[Environment: Win XP, R 2.10.1] I'm trying to install the packages JGR and iWidgets required by the extracat package to make the interactive plots in the package work. I've tried various things, but nothing seems to work. Here is my most recent attempt, followed by my sessionInfo(). Does anyone have any suggestions how to make this work? > > library(extracat) Loading required package: res...

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...les. Updated packages ---------------- adaptMCMC (1.0.3), bayesclust (3.1), bayesm (2.2-5), biwavelet (0.11), blm (2012.2.1), boss (1.1), BradleyTerry2 (1.0-0), CDVine (1.1-6), cloudRmpi (1.2), coxme (2.2-3), cvTools (0.3.2), dbstats (1.0.2), dcmle (0.2-1), DescribeDisplay (0.2.3), doBy (4.5-3), extracat (1.5-0), fanc (0.18), fanovaGraph (1.2), fastICA (1.1-15), fda (2.2.8), FrF2 (1.4-1), gdsfmt (0.9.9), gmp (0.5-2), HAC (0.2-2), heplots (0.9-12), HTMLUtils (0.1.5), ImageMetrics (0.5), IPMpack (1.1), IsotopeR (0.4.2), lifecontingencies (0.9.3), M3 (0.3), maps (2.2-6), MatrixEQTL (1.6.0), mefa4 (0.2...

...1.5.6), countrycode (0.4), cshapes (0.2-3), Deducer (0.2-3), DEoptim (2.0-4), DescribeDisplay (0.2.2), deSolve (1.7), DiagnosisMed (0.2.3), diffractometry (0.1-02), DoE.base (0.9-17), dplR (1.2.9), dti (0.9-0), dynGraph (0.99100403), e1071 (1.5-23), eha (1.2-18), epitools (0.5-5), estout (1.0.1-1), extracat (1.0-1), extremevalues (2.0), far (0.6-3), farmR (1.1), FD (1.0-7), flashClust (1.00), flexmix (2.2-5), fmri (1.4-0), forensim (1.1-4), FrF2 (1.1), ftsa (1.5), fxregime (1.0-0), GAMens (1.1.1), gcExplorer (0.9-3), GEOmap (1.5-4), GeoXp (1.4.2), GeoXp (1.4.3), ggplot2 (0.8.7), gmt (1.1-4), gRapHD (0...