Displaying 4 results from an estimated 4 matches for "eukaryot".
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eukaryotes
2005 Sep 23
2
multi-class histogram?
I am new to R, and I couldn't find the answers to my question in a faq.
This could however be because I didn't know what to look for...:)
I have three classes of data, data for bacteria, archaea and eukaryotes.
I wish to display these in a histogram where all of the values are used
to calculate each column. But, I want each column split in three, where
the size of each coloured area represents the proportions of the values
in that column that comes from each of the three classes. Do you have
any t...
2007 Nov 14
1
reading tables from url
I'm trying to read some web tables directly into R. These are both
genome sequencing projects (eukaryotes and metagenomes) from NCBI and
look very similar; however, only the first one works.
http://www.ncbi.nlm.nih.gov/genomes/leuks.cgi
http://www.ncbi.nlm.nih.gov/genomes/lenvs.cgi
I added ?dump=selected to the end of the url string to get a tab-
delimited file (which is what happens if you cl...
2007 Apr 24
0
new version of seqinR
...rranged.oriloc() available, to plot nucleotide skews
on artificially rearranged prokaryotic chromosomes.
o New function gbk2g2.euk() available. Similarly to gbk2g2(), this function
extracts the coding sequence annotations from a GenBank format file. This
function is specifically designed for eukaryotic sequences, i.e. with
introns.
The output file will contain the coordinates of the exons, along with the
name of the CDS to which they belong.
o After an e-mail by Marcelo Bertalan on 26 Mar 2007, a bug in oriloc()
when
the gbk argument was NULL was found and fixed by Anamaria Necsulea....
2007 Apr 24
0
new version of seqinR
...rranged.oriloc() available, to plot nucleotide skews
on artificially rearranged prokaryotic chromosomes.
o New function gbk2g2.euk() available. Similarly to gbk2g2(), this function
extracts the coding sequence annotations from a GenBank format file. This
function is specifically designed for eukaryotic sequences, i.e. with
introns.
The output file will contain the coordinates of the exons, along with the
name of the CDS to which they belong.
o After an e-mail by Marcelo Bertalan on 26 Mar 2007, a bug in oriloc()
when
the gbk argument was NULL was found and fixed by Anamaria Necsulea....