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2007 May 04
0
Predicted Cox survival curves - factor coding problems...
...cally get a separate curve for each strata. My problem is how to deal with the variable sitenew, which is a 3 level factor (coded 0,1,2). coxsnps$edu <- as.factor(coxsnps$edu) coxsnps$sitenew <- as.factor(coxsnps$sitenew) test1 <- coxph(Surv(time,censor) ~ snp1 + sex + sitenew + geno + eth_self + strata(edu), data=coxsnps) coef exp(coef) se(coef) z p snp1 -0.4324 0.649 0.1073 -4.031 5.5e-05 sex 0.0604 1.062 0.0915 0.660 5.1e-01 sitenew1 0.5128 1.670 0.1381 3.712 2.1e-04 site...