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Hi all, I seem to be getting segfaults when attempting to build R 4.4.0 on RHEL 9.1 (5.14.0-162.23.1.el9_1.x86_64). Interestingly, it seems to build ok on Rocky 9.1 and 9.3. This is the trace: make[3]: Entering directory '/home/esteva.m/R/R-4.4.0/src/library/grDevices' building package 'grDevices' make[4]: Entering directory '/home/esteva.m/R/R-4.4.0/src/library/grDevices' all.R is unchanged make[4]: Leaving directory '/home/esteva.m/R/R-4.4.0/src/library/grDevices' make[4]: Entering directory ...

...h)-rpms dnf install -y yum-utils dnf install -y https://dl.fedoraproject.org/pub/epel/epel-release-latest-9.noarch.rpm yum-builddep -y R Just bringing this to your attention as the issue is not with R by the looks, as I was unable to reproduce on Rocky Linux 9.1. Kind regards and thanks! Miguel Esteva Senior ITS Research Systems Engineer The Walter and Eliza Hall Institute of Medical Research 1G Royal Parade Parkville VIC 3052 Australia Phone (03) 9345 2909<callto:(03)%209345%202909> Email esteva.m at wehi.edu.au Web http://www.wehi.edu.au<http://www.wehi.edu.au/> _____________...

Dear Miguel Esteva, I couldn't get a Red Hat "ubi9" container to install enough dependencies to build R. Is there a way to reproduce your setup on a virtual machine somewhere? On Fri, 3 May 2024 00:42:43 +0000 Miguel Esteva via R-help <r-help at r-project.org> wrote: > *** caught segfault *...

...I'm good now, but it might help others to get this fixed. Simon. -----Original Message----- From: Ivan Krylov <ikrylov at disroot.org> Sent: 08 May 2024 20:05 To: Simon Andrews <simon.andrews at babraham.ac.uk> Cc: Simon Andrews via R-help <r-help at r-project.org>; Miguel Esteva <esteva.m at wehi.edu.au> Subject: Re: [R] Compilation problems with R4.4.0 ? Wed, 8 May 2024 16:59:25 +0000 Simon Andrews <simon.andrews at babraham.ac.uk> ?????: > The lapack libraries are: > > $ rpm -qa | grep lapack > lapack-3.9.0-10.el9.x86_64 > lapack64_-3.9.0-10...

? Wed, 8 May 2024 16:59:25 +0000 Simon Andrews <simon.andrews at babraham.ac.uk> ?????: > The lapack libraries are: > > $ rpm -qa | grep lapack > lapack-3.9.0-10.el9.x86_64 > lapack64_-3.9.0-10.el9.x86_64 > lapack64-3.9.0-10.el9.x86_64 > lapack-devel-3.9.0-10.el9.x86_64 Thanks for this information! I figured out I needed to enable the "PowerTools/CRB" repo,

I'm having a strange problem compiling R4.4.0 on an AlmaLinux9 box. I've compiled previous versions OK on the same hardware/software (last was R4.3.2) but 4.4.0 is repeatedly failing. Configuration works OK. ./configure --prefix=/bi/apps/R/4.4.0 --enable-R-shlib R is now configured for x86_64-pc-linux-gnu Source directory: . Installation directory: /bi/apps/R/4.4.0