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eseter
2011 Jun 28
1
help required for GO Annotation problem
...sically want to use R-help, and post some problems which I am facing. The Ref is a well known Genome Biology paper "Bioconductor: open software development for computational biology and bioinformatics" by Robert C Gentleman et al., 2004. Generating Heatmaps till Fig2 is working so I think esetSel is not the problem..
However, for generating the Figure 3, for GO annotations the following command is not working:
> ll <- mget(geneNames(esetSel),hgu95av2LOCUSID)
#it is displaying error messages Error in mget(geneNames(esetSel), hgu95av2LOCUSID) : object 'hgu95av2LOCUSID' not f...