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I am using 'igraph' package to make some graphs of 'gene-gene interaction'. I can get a data.frame which has three columns. gene1 gene2 pvalue AGT MLR 1.2e-04 MLR 11BHSD1 1.71e-05 IFG2 11BHSD2 2.2e-07 . . . . . . . . . AGTR1 NPPA

Hi all, Can some one tell me the difference between the following two formulas? 1. epiG.rf <-randomForest(gamma~.,data=data, na.action = na.fail,ntree = 300,xtest = NULL, ytest = NULL,replace = T, proximity =F) 2.epiG.rf <-randomForest(gamma~.,data=data, na.action = na.fail,ntree = 300,xtest = NULL, ytest = NULL,replace = T, proximity =F) [[alternative HTML version deleted]]

...received so far) [sender] rsync error: error allocating core memory buffers (code 22) at io.c(605) [sender=3.0.9] I am attaching a -avvvv output at the end of the mail. I cannot figure out what the matter may be. Thank you in advance, Pedro Fortuny. -- Pedro Fortuny Ayuso http://pfortuny.net EPIG, Campus de Viesques, Gijon Dpto. de Matematicas Universidad de Oviedo fortunypedro at uniovi.es -------------- next part -------------- >From pedrofortunyayuso at mypera.local Fri Oct 28 15:45:11 2011 Return-Path: <pedrofortunyayuso at mypera.local> X-Original-To: pedrofortunyayuso Deliv...