search for: ensp

...NON_SYNONYMOUS_CODING 1924 1127 376 G/D gGt/gAt rs61744960 18 NMD_TRANSCRIPT,NON_SYNONYMOUS_CODING 1450 1064 355 G/D gGt/gAt rs61744960 19 NON_SYNONYMOUS_CODING 6144 5284 1762 I/V Ata/Gta rs2454206 20 NON_SYNONYMOUS_CODING 6144 5347 1783 I/V Ata/Gta rs2454206 V14 1 ENSP=ENSP00000409435;HGNC=SF3B1 2 ENSP=ENSP00000335321;HGNC=SF3B1 3 ENSP=ENSP00000335321;HGNC=SF3B1 4 ENSP=ENSP00000335321;HGNC=SF3B1 5 ENSP=ENSP00000384852;HGNC=DNMT3A 6 ENSP=ENSP00000324375;HGNC=DNMT3A 7 ENSP=ENSP00000264709;HGNC=DNMT3A 8 ENSP=ENSP00000370132;HGNC=DNMT3A 9 ENSP=ENSP00000263967;PolyPh...

Hi, Is there a way in R to get the string which matches the expression, where the expression is a substring of the parent string. Lets say, I have $i <- "transcript:ENST0000112334 pid:ENSP000012345" What I need is the string "pid:ENSP000012345" from $i using the query "ENSP". Appreciate your comments. Praveen Surendran School of Medicine and Medical Sciences University College Dublin Belfiled, Dublin 4 Ireland. [[alternative HTML version d...

...---------------------- Is there some way to make R issue either a warning or an error message in such a situation? I am using R version 2.15.1 64-bit on Windows 7 Professional. Thank you very much. Paulo Barata --------------------------------------------------------------------- Paulo Barata ENSP - Funda??o Oswaldo Cruz Rua Leopoldo Bulh?es 1480 - 8A 21041-210 Rio de Janeiro - RJ Brazil E-mail: paulo.barata at ensp.fiocruz.br

...;m completely stuck... So, any tip will be more than welcome...I will really appreciate it!!! Thanks in advance and congrats on the amazing mailing-list. Bests from Rio de Janeiro, Brazil. Monica Monica Malta Researcher Oswaldo Cruz Foundation - FIOCRUZ Social Science Department - DCS/ENSP Rua Leopoldo Bulhoes, 1480 - room 905 Manguinhos Rio de Janeiro - RJ 21041-210 Brazil phone +55.21.2598-2715 fax +55.21.2598-2779 [[alternative HTML version deleted]]

...ou very much. Paulo Barata -------------------------------------------------------------------- Paulo Barata Fundacao Oswaldo Cruz - Oswaldo Cruz Foundation Rua Leopoldo Bulhoes 1480 - 8A 21041-210 Rio de Janeiro - RJ Brazil E-mail: pbarata at infolink.com.br Alternative e-mail: paulo.barata at ensp.fiocruz.br

...dows XP. Regards, Paulo Barata --------------------------------------------------------------- Paulo Barata Fundacao Oswaldo Cruz - Oswaldo Cruz Foundation Rua Leopoldo Bulhoes 1480 - 8A 21041-210 Rio de Janeiro - RJ Brazil E-mail: pbarata at infolink.com.br Alternative e-mail: paulo.barata at ensp.fiocruz.br

...ou very much. Paulo Barata -------------------------------------------------------------------- Paulo Barata Fundacao Oswaldo Cruz - Oswaldo Cruz Foundation Rua Leopoldo Bulhoes 1480 - 8A 21041-210 Rio de Janeiro - RJ Brazil E-mail: pbarata at infolink.com.br Alternative e-mail: paulo.barata at ensp.fiocruz.br

...09e-13 x1 -4.771409e-13 7.127168e-13 sqrt(diag(vcovHC(banco.glm7, type="HC0"))) (Intercept) x1 6.923295e-07 8.426314e-07 # I think this result isn?t correct, because standard errors are so small. Thank you for the help, Roberta Niquini. -- ENSP - Fiocruz

...er. Thank you very much. Paulo Barata -------------------------------------------------------------------- Paulo Barata Fundacao Oswaldo Cruz - Oswaldo Cruz Foundation Rua Leopoldo Bulhoes 1480 - 8A 21041-210 Rio de Janeiro - RJ Brazil E-mail: pbarata at infolink.com.br E-mail: paulo.barata at ensp.fiocruz.br

...08). Thank you very much. Regards, Paulo Barata ----------------------------------------------------------------------- Paulo Barata Fundacao Oswaldo Cruz Rua Leopoldo Bulhoes 1480 - 8A 21041-210 Rio de Janeiro - RJ Brazil E-mail: pbarata at infolink.com.br Alternative e-mail: paulo.barata at ensp.fiocruz.br

...much. Regards, Paulo Barata ------------------------------------------------------------------ Paulo Barata Fundacao Oswaldo Cruz - Oswaldo Cruz Foundation Rua Leopoldo Bulhoes 1480 - 8A 21041-210 Rio de Janeiro - RJ Brazil E-mail: pbarata at infolink.com.br Alternative e-mail: paulo.barata at ensp.fiocruz.br

...; -------------------------------------------------------------- > Paulo Barata > Fundacao Oswaldo Cruz - Oswaldo Cruz Foundation > Rua Leopoldo Bulhoes 1480 - 8A > 21041-210 Rio de Janeiro - RJ > Brazil > > E-mail: pbarata@infolink.com.br > Alternative e-mail: paulo.barata@ensp.fiocruz.br > > ______________________________________________ > R-help@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide > http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, re...

...ou very much. Paulo Barata -------------------------------------------------------------------- Paulo Barata Fundacao Oswaldo Cruz - Oswaldo Cruz Foundation Rua Leopoldo Bulhoes 1480 - 8A 21041-210 Rio de Janeiro - RJ Brazil E-mail: pbarata at infolink.com.br Alternative e-mail: paulo.barata at ensp.fiocruz.br

Dear Sirs, Could you please be so kind as to send us some information on residuals in multinomial logistic models? Is it possible to use R software? We thank you in advance. Sincerely yours Luciana Alves,MSc Beatriz Leimann, MD -- Luciana Correia Alves Doutoranda em Sa??de P??blica ENSP - Fiocruz

Hi, I have a CSV file where each row has at least 20 columns and some rows have up to 30 columns of data. When I use the command, Pathways<-read.table('MetaCycSample3.csv',sep=',',header=FALSE,quote='"') anything past the 21st column gets kicked down to a new row. How can I fix this? Thanks, -Nina

Hello, this is probably trivial but I failed to find this particular snippet of code. What I got: my_dataframe (contains say a 40k rows and 4 columns) distances (vector with euclidean distances between a query vector and each of the rows of my_dataframe) What I do: after scaling data my_dataframe I calculate distances. order them then extract top five hits my_dataframe <-

...ope-sender <>) by mailserver-55.ig.com.br (qmail-ldap-1.03) with QMQP for <>; 28 Apr 2005 16:43:05 -0000 Delivered-To: CLUSTERHOST email-83.ig.com.br steve@ig.com.br Received: (qmail 12734 invoked from network); 28 Apr 2005 16:36:04 -0000 Received: from micro-170-236.ensp.fiocruz.br (HELO r-project.org) ([157.86.170.236]) (envelope-sender <r-devel@r-project.org>) by email-83.ig.com.br (qmail-ldap-1.03) with SMTP for <steve@ig.com.br>; 28 Apr 2005 16:36:04 -0000 Received-SPF: none (email-83.ig.com.br: domain at r-project.org...

...===================================== ---------------------------------------------------------- Paulo Barata Fundacao Oswaldo Cruz - Oswaldo Cruz Foundation Rua Leopoldo Bulhoes 1480 - 8A 21041-210 Rio de Janeiro - RJ Brazil E-mail: pbarata at infolink.com.br Alternative e-mail: paulo.barata at ensp.fiocruz.br

Please excuse me for asking such basic questions: Here is my code > y=c(1.21,0.51,0.14,1.62,-0.8,0.72,-1.71,0.84,0.02,-0.12) > ybar=mean(y) > ll=length(y); > ybarv=rep(ybar,ll) > x=1:ll > plot(x,ybarv,pch=1) > segments(x[1],ybar,x[ll],ybar) What I get is a collection of small circles, with a segment "on top" of the circles, which is almost what I want. But I

...ct.org Message-ID: <002501c9ffcc$a7d51260$f77f3720$%surendran@ucd.ie> Content-Type: text/plain Hi, Is there a way in R to get the string which matches the expression, where the expression is a substring of the parent string. Lets say, I have $i <- "transcript:ENST0000112334 pid:ENSP000012345" What I need is the string "pid:ENSP000012345" from $i using the query "ENSP". Appreciate your comments. Praveen  Surendran School of Medicine and Medical Sciences University College Dublin Belfiled, Dublin 4 Ireland.     [[alternative HTML version d...