Displaying 1 result from an estimated 1 matches for "enrichmentplot".
2011 Apr 15
2
Sweave Executes Package Functions Twice
...ample 2
Processing sample 3
If I open up a new R session, and copy and paste the lines of code from the .Rnw one by one, the function isn't called twice - only one complete set of progress outputs show.
I tried using debug() to get more of an idea of what was happening. The function is called enrichmentPlot, so I did debug(enrichmentPlot), then Sweave("vignette.Rnw"). Execution pauses when it gets to the right code chunk, then I type in "n" at the Browse[2]> prompt, but I don't get any output from debug, like "debugging in:", but it runs for a while and I get all o...